Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000890-TA|BGIBMGA000890-PA|IPR000342|Regulator of G
protein signalling, IPR001683|Phox-like, IPR003114|PX-associated,
IPR013937|Sorting nexin, C-terminal
(844 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 36 0.15
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 36 0.15
At1g15240.1 68414.m01824 phox (PX) domain-containing protein wea... 36 0.15
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 34 0.34
At1g48430.1 68414.m05414 dihydroxyacetone kinase family protein ... 33 0.79
At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase... 32 1.8
At3g17770.1 68416.m02267 dihydroxyacetone kinase family protein ... 32 1.8
At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea... 32 1.8
At2g34780.1 68415.m04270 expressed protein 31 2.4
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 31 3.2
At5g16500.1 68418.m01928 protein kinase family protein contains ... 31 4.2
At2g16900.1 68415.m01946 expressed protein 31 4.2
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 30 5.6
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 30 5.6
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 30 5.6
At4g39120.1 68417.m05539 inositol monophosphatase family protein... 30 7.4
At4g24090.1 68417.m03459 expressed protein 30 7.4
At1g08270.2 68414.m00912 expressed protein low similarity to SP|... 30 7.4
At1g08270.1 68414.m00913 expressed protein low similarity to SP|... 30 7.4
At5g54820.1 68418.m06828 F-box family protein contains Pfam:PF00... 29 9.8
At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro... 29 9.8
At4g14310.2 68417.m02205 peroxisomal membrane protein-related co... 29 9.8
At4g14310.1 68417.m02204 peroxisomal membrane protein-related co... 29 9.8
At3g62490.1 68416.m07021 expressed protein hypothetical proteins... 29 9.8
At1g50600.1 68414.m05683 scarecrow-like transcription factor 5 (... 29 9.8
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 35.5 bits (78), Expect = 0.15
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 17/164 (10%)
Query: 489 PEQITTGWVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTLI 548
PE IT+ ++LR N+F +L+ ++ E LP K + ++ L++ + +
Sbjct: 138 PEGITSARLVLRRFNDFLELYSSIK---KEFVKKSLPQAPPKKILRMRNQTLLEERRCSL 194
Query: 549 QKYLEFVLEDDRLNQSEALYTFLNP--------SSEYLKQE----DMPKKNKFSLSTL-- 594
+ ++ +L D +++S + TFL + EY + E D+P ++S +
Sbjct: 195 EDWMNRLLSDIDISRSALIATFLELEAAVRSYFNDEYQETEDTSGDIPSLLPTTISDVPG 254
Query: 595 FKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGNKT 638
S + + N S+ E + M DE + N N T
Sbjct: 255 SSSVTIDHDNDSADETSNASTMKHDEANLKNLFSRNSTAVDNVT 298
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 35.5 bits (78), Expect = 0.15
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 93 QKIIQYLEAQKEVNAMHIRT-HEYAKTFED-YIRLINSCNNVDTLKRLRYDIVTQ-IMQA 149
+K++Q +E + A H+RT + KT E+ Y IN + + + ++I TQ + Q
Sbjct: 154 RKVVQEIERRISTQAEHLRTQNNIFKTREEKYQSRINVLEALASGTGVEHEIATQQLRQI 213
Query: 150 TTLQNV----KRAKGIDLDAIEKSNTQHNISRQQITDAKKLQRYINQLTIAKAECETALR 205
T +++ K+ + D+ + K N QHN+ + + + + ++ E +T
Sbjct: 214 ETEKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQELETTKRKYEQQYSQIESQTKTE 273
Query: 206 KMGWDGAFPTFETDSKTL 223
K W+ E D L
Sbjct: 274 KSKWEEQKKNEEEDMDKL 291
>At1g15240.1 68414.m01824 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 706
Score = 35.5 bits (78), Expect = 0.15
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 30 LAPHLTSFETEQHYLRQI-SELIIMFLLPRCYSLAPGCHLMREILACKILQPAIDLVTEP 88
L P L S E+E L+ I + LI++ P A + +RE+ AC +++P ++L P
Sbjct: 216 LHPALFSPESEHKVLQHIVNSLILVTFRPEDLHCAFFHYTVRELFACCVIRPVLNL-ANP 274
Query: 89 DYINQKI 95
+IN++I
Sbjct: 275 RFINERI 281
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 34.3 bits (75), Expect = 0.34
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 592 STLFKSASSEATNRSSQEKEAFNHMSADEDEISMYLD--GNGAEAGNKTMTNSLRGAS 647
ST KS S+ N + E E +ADEDEIS L G NKT+ N+ G S
Sbjct: 1166 STEAKSLLSDLDNSVNTEPENSQGSAADEDEISSSLRKMAEGVRLRNKTLENNFEGFS 1223
>At1g48430.1 68414.m05414 dihydroxyacetone kinase family protein
similar to dihydroxyacetone kinases; contains Pfam
profiles PF02733: DAK1 domain, PF02734: DAK2 domain
Length = 593
Score = 33.1 bits (72), Expect = 0.79
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 594 LFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGNKTMTNSLRGASAIAEER 653
L K+A +E S E + + A + IS GA AG +TM ++L AS + EE+
Sbjct: 462 LCKAAYAELKANSQSETTSKHWSEALKSSISAVSKYGGATAGYRTMLDALIPASKVLEEK 521
Query: 654 DSTAE-PLYALL 664
S E P+ A +
Sbjct: 522 LSVGEDPIAAFV 533
>At4g39210.1 68417.m05551 glucose-1-phosphate adenylyltransferase
large subunit 3 (APL3) / ADP-glucose pyrophosphorylase
identical to SP|P55231
Length = 521
Score = 31.9 bits (69), Expect = 1.8
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 128 SCNNVDTLKRLRYDIVTQIMQATTLQNVKRAKGIDLDAIEKSNTQHNISRQQITDAKKLQ 187
SC VD + Y +V + ++ GIDL +++ T H +S Q+ +
Sbjct: 241 SCAPVDESRASEYGLVNIDRSGRVVHFSEKPTGIDLKSMQTDTTMHGLSHQEAAKSP--- 297
Query: 188 RYINQLTIAKAECETALRKMGW 209
YI + + + E L+ + W
Sbjct: 298 -YIASMGVYCFKTEALLKLLTW 318
>At3g17770.1 68416.m02267 dihydroxyacetone kinase family protein
contains Pfam domains, PF02733: DAK1 domain and PF02734:
DAK2 domain
Length = 595
Score = 31.9 bits (69), Expect = 1.8
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 594 LFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGNKTMTNSLRGASAIAEER 653
L K+A +E + E N A + I+ GA AG +TM ++L AS + EE+
Sbjct: 463 LCKAAYAELKANAQSEVTPKNWSEALKSSIASVSKYGGATAGYRTMLDALIPASQVLEEK 522
Query: 654 DSTAE-PLYALL 664
S E P+ A +
Sbjct: 523 LSAGEDPISAFI 534
>At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 1009
Score = 31.9 bits (69), Expect = 1.8
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 30 LAPHLTSFETEQHYLRQI-SELIIMFLLPRCYSLAPGCHLMREILACKILQPAIDLVTEP 88
L P L S E+E L++I + ++ + L PR + REI+ C ++QP ++L P
Sbjct: 230 LYPALVSPESEYKVLQKIVAGILSVVLRPREAQCPLVRTIAREIVTCLVIQPLLNLAC-P 288
Query: 89 DYINQKIIQYLEAQKEVN 106
+ IN+ + KE N
Sbjct: 289 ERINEVFEIIINLIKEGN 306
Score = 30.3 bits (65), Expect = 5.6
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 496 WVLLRTLNEFQDLHRKLRPLCSELKNLELPSNSFKFLFGKNDKNSLDKAKTL-IQKYLEF 554
W + R + F+ LHR+L+ + + NL+LP K +F + +++ + + + KYL+
Sbjct: 560 WFVKRRYSNFERLHRQLKEIPN--YNLQLPP---KRIFSSSTEDAFVHRRCIQLDKYLQD 614
Query: 555 VLEDDRLNQSEALYTFLNPSSE 576
+L + + ++ FL+ +S+
Sbjct: 615 LLCIANVAEQHEVWDFLSAASK 636
>At2g34780.1 68415.m04270 expressed protein
Length = 1297
Score = 31.5 bits (68), Expect = 2.4
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 100 EAQKEVNAMHIRTHEYAKTFEDYIRLINSCNNVDTLKRLRYDIVTQIMQATTLQNVKRAK 159
E + + + ++ E ++ E+ IRL+ + R D +TQ +Q L K
Sbjct: 285 EMESQTASSQVKFAENSEKLEEKIRLLEMNKKTAMDWKSRTDDLTQQLQEAQLVAEGLKK 344
Query: 160 GI-DLDAIEKSNTQHNISRQQITDAKKLQ 187
+ +L +KS H+IS Q++ D +K +
Sbjct: 345 QVHELSLSQKSIKTHSISPQKVRDLEKAE 373
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 31.1 bits (67), Expect = 3.2
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 281 RSPSAEIKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKY---YHSFLMSEEYKA 337
R + E+ + D KR+ L K ++QET+ I++K +L++E+ KA
Sbjct: 282 RHQAQEVLEELDVHKRLRLTLELMKKEMEISKIQETIAKAIEEKISGEQRRYLLNEQLKA 341
Query: 338 LIAELATEENSK 349
+ EL E + K
Sbjct: 342 IKKELGVETDDK 353
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 30.7 bits (66), Expect = 4.2
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 577 YLKQEDMPKKNKFSLSTLFKSASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGN 636
Y +D P+ +++L E + Q + H S ED+ S+Y D + E+G
Sbjct: 559 YSDHDDSPRNTSMRINSLSHDDDEEEEEENHQTRLEHIHSSKSEDQ-SVYSDDDAGESGE 617
Query: 637 KTM 639
++
Sbjct: 618 SSL 620
>At2g16900.1 68415.m01946 expressed protein
Length = 382
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 285 AEIKVDKDTRKRMESFLLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALIAELAT 344
A+ + + D+ K + L+ K ++ E+QE L I+ + + L EE KA +AEL T
Sbjct: 300 AQYQENTDSEKERQEGLVRSKKQEM--EIQEADLARIEKEVAEARLRVEEMKAELAELET 357
Query: 345 E 345
E
Sbjct: 358 E 358
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 30.3 bits (65), Expect = 5.6
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 383 HSTYARRKLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEAHLAR 442
H YARR ++ Q+R K Q+ L + P M A L GE+ L+ L
Sbjct: 443 HDYYARRLWEEQQKR---KDQSKLTLDVKVSPT--VQKMTAETRGSLLGEKP-LQRSLKE 496
Query: 443 TDTWAEHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSGDRPEQ 491
TDT A G ++ + +D +S Q K+D +R EQ
Sbjct: 497 TDTSASSGGSFQFPTNLSDTFTKSASSQEAADAVKPFKDDPAKQERFEQ 545
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 30.3 bits (65), Expect = 5.6
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 5/142 (3%)
Query: 288 KVDKDTRKRMESF----LLGDKGPDVFYEVQETVLDTIQDKYYHSFLMSEEYKALIAELA 343
K++ +KR +S +L + D F +E + TI+ + H L + L A
Sbjct: 356 KMELFNKKRQDSSGKLPMLDSQLQDYFRLKEEAGMKTIKLRDEHEVLERQRRTDLEALRN 415
Query: 344 TEENSKDTNVDRSPIEERQLSNXXXXXXXXXXGALHLTEHSTYARRKLDQLQERHNNKIQ 403
EEN + ++ ++E Q+ + +T + +L LQE+H N +
Sbjct: 416 LEENYQQLINRKNDLDE-QIKRFKDRQGEIETSSSKYKNETTSLKTELRALQEKHVNARE 474
Query: 404 ALAALRASLKPESPALSMLANE 425
A A L+ + LS L E
Sbjct: 475 ASAKLKTRIAELEDQLSDLTAE 496
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 30.3 bits (65), Expect = 5.6
Identities = 50/224 (22%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 388 RRKLDQLQERHNNKIQALAALRA---SLKPESPA-LSMLANEVEKLAGEQMRLEAHLART 443
R + D+ + + K++ + + SLK E+ + L+ E+++L GE L ++
Sbjct: 109 RSQKDESEAKLEKKVEEVTETKMQLKSLKEETEEERNRLSEEIDQLKGENQMLHRRISEL 168
Query: 444 DTWAEHLGRWRASVHSADVIDESKPPQFVIVVHMAEKEDSNSGDRPEQITTGWVLLRTLN 503
D+ H+ S H + D SK K D+ D+ + + ++R L+
Sbjct: 169 DSL--HMEMKTKSAHEME--DASK------------KLDTEVSDQKKLVKEQDDIIRRLS 212
Query: 504 -EFQDLHRKLRPLCSEL-KNLELPSNSFKFLFG-----KNDKNSLDKAKTLIQKYLEFVL 556
+ +D R L+ + K E S ++ FG K + N+L++ + + +
Sbjct: 213 AKIKDQQRLLKEQKDTIDKFAEDQKQSKRWSFGSSRDLKLNPNALERKMEELAEDFRMKI 272
Query: 557 EDD------RLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTL 594
ED R++ +E ++ L +EY+K DM K+NK + +L
Sbjct: 273 EDHIRILYRRIHVAEQIH--LESKNEYIKTRDMLKENKENRESL 314
>At4g39120.1 68417.m05539 inositol monophosphatase family protein
low similarity to Mono-phosphatase [Streptomyces
anulatus] GI:1045231; contains Pfam profile PF00459:
Inositol monophosphatase family
Length = 346
Score = 29.9 bits (64), Expect = 7.4
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 16 RSCALELNQAPVFALAPHLTSFETEQHYLRQISELIIMFLLPRCYSLA 63
RSC +L+QA ++ +PHL S E E+ Y R ++ + CY+ A
Sbjct: 224 RSCP-KLSQAYLYTTSPHLFSEEAEKAYSRVRDKVKVPLYGCDCYAYA 270
>At4g24090.1 68417.m03459 expressed protein
Length = 308
Score = 29.9 bits (64), Expect = 7.4
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 148 QATTLQNVKRAKGIDLDAIEKSNTQHNISRQQITD-------AKKLQRYINQLTIAKAEC 200
Q L + + KG+ LD +EK++ + I+++++ D AK LQ YINQL AE
Sbjct: 72 QVEELLSREENKGL-LDGLEKASLRVEIAKRELEDIERQEIEAKLLQDYINQLESRAAEI 130
Query: 201 ETALRKMGWDGAFPTFETDSKTLPL 225
+++ D A E ++L L
Sbjct: 131 AECQQEI--DAARSMVEEAERSLSL 153
>At1g08270.2 68414.m00912 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 132
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 311 YEVQETVLDTIQDKYYHSFLMSEEYKALIAELATEENSK-DTNVDRSP 357
YE + D I DK+Y +EE +A++ E+ + + S D V P
Sbjct: 13 YEKNPRIRDAITDKFYEYLRRAEEIRAVLVEVGSGKGSNGDAAVATKP 60
>At1g08270.1 68414.m00913 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 126
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 311 YEVQETVLDTIQDKYYHSFLMSEEYKALIAELATEENSK-DTNVDRSP 357
YE + D I DK+Y +EE +A++ E+ + + S D V P
Sbjct: 13 YEKNPRIRDAITDKFYEYLRRAEEIRAVLVEVGSGKGSNGDAAVATKP 60
>At5g54820.1 68418.m06828 F-box family protein contains Pfam:PF00646
F-box domain
Length = 472
Score = 29.5 bits (63), Expect = 9.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 104 EVNAMHIRTHEYAKTFEDYIRLINSCNNVDTLKRLRYDIVT 144
E + +RT + K F I L+N+C N++T L +DI+T
Sbjct: 328 ETRHLVLRTKMHTKEFNGIILLLNNCPNLET---LGFDILT 365
>At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing
protein similar to meiotic asynaptic mutant 1
[Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica
oleracea var. alboglabra] GI:23506946; contains Pfam
profile PF02301: HORMA domain
Length = 1399
Score = 29.5 bits (63), Expect = 9.8
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 390 KLDQLQERHNNKIQALAALRASLKPESPALSMLANEVEKLAGEQMRLEAHLARTDTWAEH 449
K DQ+ E K++ AS+ ++P L ++ +L RLE H++ D+ E
Sbjct: 324 KQDQV-EHQLAKVKDTKGRPASIV-QNPILQSHEYDIRRLKARLQRLERHISVPDSPQEG 381
Query: 450 LGRWRASVHS 459
+ +W A+V S
Sbjct: 382 IRKWFAAVSS 391
>At4g14310.2 68417.m02205 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 965
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 282 SPSAEIKVDKDTRKRMESFLLGDKG 306
SPS I+V D RKR ES ++G+KG
Sbjct: 148 SPSDLIRVFSDLRKRNESRVIGEKG 172
>At4g14310.1 68417.m02204 peroxisomal membrane protein-related
contains weak similarity to Peroxisomal membrane protein
2 (22 kDa peroxisomal membrane protein)
(Swiss-Prot:P42925) [Mus musculus]
Length = 1087
Score = 29.5 bits (63), Expect = 9.8
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 282 SPSAEIKVDKDTRKRMESFLLGDKG 306
SPS I+V D RKR ES ++G+KG
Sbjct: 148 SPSDLIRVFSDLRKRNESRVIGEKG 172
>At3g62490.1 68416.m07021 expressed protein hypothetical proteins -
Arabidopsis thaliana
Length = 559
Score = 29.5 bits (63), Expect = 9.8
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 355 RSPIEERQLSNXXXXXXXXXXGALHLTEHSTYARRK--LDQLQERHNNKIQALAALRASL 412
RS +E L+N L L + + RK DQ + + ++ +AALR +
Sbjct: 359 RSSLETAALANDLIATYDRKL-KLKLADREAFDNRKKCADQAKAIYAKDMKEMAALRDAA 417
Query: 413 KPESPALSMLANEVEKLAGEQMRLEAHLA 441
+ +S L NEV++L + L+ ++
Sbjct: 418 EIHKAEMSSLNNEVKRLNSREADLQKEIS 446
>At1g50600.1 68414.m05683 scarecrow-like transcription factor 5
(SCL5) similar to SCARECROW GB:AAB06318 GI:1497987 from
[Arabidopsis thaliana]
Length = 597
Score = 29.5 bits (63), Expect = 9.8
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 538 KNSLDKAKTLIQKYLEFVLEDDRLNQSEALYTFLNPSSEYLKQEDMPKKNKFSLSTLFKS 597
K+ + + ++ V + D Q+ Y L SS + KN S +T F S
Sbjct: 77 KHMIQEGSSMFYHQPSSVKQMDLSVQTFDSYCTLESSSGTKSHPCLNNKNNSSSTTSFSS 136
Query: 598 ASSEATNRSSQEKEAFNHMSADEDEISMYLDGNGAEAGNKT 638
S + ++ FN+ S +E+ S L G+ A N+T
Sbjct: 137 NESPISQANNNNLSRFNNHSPEENNNSP-LSGSSATNTNET 176
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.131 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,478,416
Number of Sequences: 28952
Number of extensions: 757955
Number of successful extensions: 2271
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2255
Number of HSP's gapped (non-prelim): 34
length of query: 844
length of database: 12,070,560
effective HSP length: 87
effective length of query: 757
effective length of database: 9,551,736
effective search space: 7230664152
effective search space used: 7230664152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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