GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000889-TA|BGIBMGA000889-PA|undefined
         (131 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5437 Cluster: PREDICTED: similar to inositol t...    32   4.2  
UniRef50_Q2JIU9 Cluster: Penicillin-binding protein, 1A family; ...    32   4.2  
UniRef50_A3U6C1 Cluster: Putative uncharacterized protein; n=1; ...    31   7.3  
UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,...    31   9.6  
UniRef50_Q6A755 Cluster: Putative uncharacterized protein; n=1; ...    31   9.6  

>UniRef50_UPI00015B5437 Cluster: PREDICTED: similar to inositol
           triphosphate 3-kinase c; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to inositol triphosphate 3-kinase c -
           Nasonia vitripennis
          Length = 483

 Score = 31.9 bits (69), Expect = 4.2
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)

Query: 10  VMWRVAIIQR-----RIFDGCLNLAYDIVKISSHIYKFRTTTFGPSVYRANITRS 59
           ++W++  + R     RIF   L +AYD  ++  H+ +    +F  S+ RA + RS
Sbjct: 227 ILWKILALFREQRRYRIFSSSLLIAYDAKRLRHHMRRQLNNSFAESLLRAPVCRS 281


>UniRef50_Q2JIU9 Cluster: Penicillin-binding protein, 1A family;
           n=4; Cyanobacteria|Rep: Penicillin-binding protein, 1A
           family - Synechococcus sp. (strain JA-2-3B'a(2-13))
           (Cyanobacteria bacteriumYellowstone B-Prime)
          Length = 672

 Score = 31.9 bits (69), Expect = 4.2
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 42  FRTTTFGPSVYRANITRSVEDLPLCRLASQKGIQNIIRAIQLTNMTA 88
           +  T +GP  +   +  S  ++P  +LA   GI+N+I A Q T +TA
Sbjct: 457 YDNTFYGPLTFARALELS-RNVPTVKLADDVGIRNVIAAAQATGITA 502


>UniRef50_A3U6C1 Cluster: Putative uncharacterized protein; n=1;
           Croceibacter atlanticus HTCC2559|Rep: Putative
           uncharacterized protein - Croceibacter atlanticus
           HTCC2559
          Length = 498

 Score = 31.1 bits (67), Expect = 7.3
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 21  IFDGCLNLAYDIVKISSHI-YKFRTTTFGPSVYRANITRSVEDLPLCRLASQKGIQNIIR 79
           +F G LN     +++   + Y      FG ++     T  +ED  +  +    G +N I 
Sbjct: 379 VFLGDLNQQLGFIEVPVELEYALINKRFGVNLIGGASTLFLEDNSIAVV--NNGNRNEIG 436

Query: 80  AIQLTNMTAVWCSDRAGAGFNYAINCSMQFSLE 112
             + TN+  V  S   G G NY I  S+QF++E
Sbjct: 437 --EATNVNNVSFSTNLGLGVNYKITSSLQFNVE 467


>UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,
           partial; n=2; Tribolium castaneum|Rep: PREDICTED:
           hypothetical protein, partial - Tribolium castaneum
          Length = 263

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)

Query: 40  YKFRTTTFGPSVYRAN---ITRSVEDLPLCRLASQ 71
           +  R T FG ++   N   +TRS+  LPLCRL +Q
Sbjct: 134 FNARHTDFGDTISNTNGRHLTRSLNTLPLCRLRNQ 168


>UniRef50_Q6A755 Cluster: Putative uncharacterized protein; n=1;
           Propionibacterium acnes|Rep: Putative uncharacterized
           protein - Propionibacterium acnes
          Length = 181

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 70  SQKGIQNIIRAIQLTNMTAVWCSDRAGAGFNYAINCSMQFSLEYVVGEGSLKPVN 124
           +Q  ++  + A+  T +   W  +R GAGF  A+  +++ + E+V G  S KP+N
Sbjct: 49  NQVRVEATVGAVMATVLEGTW--ERIGAGFRTALTTALERTDEWVGGPDS-KPLN 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.327    0.137    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,510,125
Number of Sequences: 1657284
Number of extensions: 4628889
Number of successful extensions: 10619
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 10619
Number of HSP's gapped (non-prelim): 5
length of query: 131
length of database: 575,637,011
effective HSP length: 92
effective length of query: 39
effective length of database: 423,166,883
effective search space: 16503508437
effective search space used: 16503508437
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 66 (30.7 bits)