GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000889-TA|BGIBMGA000889-PA|undefined
         (131 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   4.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   4.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   8.6  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 25 CLNLAYDIVKISSHIYKFRTTTFGP---SVYRANITRSV 60
          C  + Y++ +IS + Y     + GP   ++++ N T  V
Sbjct: 51 CALVNYNVSEISENFYYLPAMSTGPLKYAIFQKNFTNIV 89


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 2   VNKWSRRGVMWRVAIIQRRIFDGCLNLAYDIV 33
           +NK  R+G  WR    ++  FD   +L  + V
Sbjct: 559 LNKLLRKGEKWRWGRNEQEAFDRVKDLFLEAV 590


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 113 YVVGEGSLKPVNV 125
           Y  GEGS KP N+
Sbjct: 36  YRNGEGSFKPQNI 48


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YA+   MQ + E+V+G
Sbjct: 205 FEYAVGHWMQKATEHVIG 222


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YA+   MQ + E+V+G
Sbjct: 519 FEYAVGHWMQKATEHVIG 536


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YA+   MQ + E+V+G
Sbjct: 752 FEYAVGHWMQKATEHVIG 769


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YA+   MQ + E+V+G
Sbjct: 752 FEYAVGHWMQKATEHVIG 769


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YAI   +Q + E+V+G
Sbjct: 779 FEYAIGHWLQKATEHVIG 796


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YAI   +Q + E+V+G
Sbjct: 779 FEYAIGHWLQKATEHVIG 796


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YAI   +Q + E+V+G
Sbjct: 779 FEYAIGHWLQKATEHVIG 796


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 99  FNYAINCSMQFSLEYVVG 116
           F YAI   +Q + E+V+G
Sbjct: 779 FEYAIGHWLQKATEHVIG 796


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.137    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,459
Number of Sequences: 317
Number of extensions: 1097
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of query: 131
length of database: 114,650
effective HSP length: 51
effective length of query: 80
effective length of database: 98,483
effective search space:  7878640
effective search space used:  7878640
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.2 bits)
S2: 39 (19.8 bits)