Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000887-TA|BGIBMGA000887-PA|undefined
(102 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5FGN3 Cluster: Single-stranded-DNA-specific exonucleas... 36 0.16
UniRef50_Q5BF87 Cluster: Putative uncharacterized protein; n=1; ... 33 1.1
UniRef50_A5BRY8 Cluster: Putative uncharacterized protein; n=1; ... 32 2.0
UniRef50_O95382 Cluster: Mitogen-activated protein kinase kinase... 32 2.0
UniRef50_A7SUD1 Cluster: Predicted protein; n=1; Nematostella ve... 32 2.6
UniRef50_A1WC34 Cluster: DnaK-related protein; n=3; Comamonadace... 31 3.4
UniRef50_Q7QP02 Cluster: GLP_244_16200_12619; n=1; Giardia lambl... 31 3.4
UniRef50_Q8F0W3 Cluster: Transcription elongation factor; n=4; L... 31 4.5
UniRef50_UPI00006CB7A2 Cluster: hypothetical protein TTHERM_0034... 31 6.0
UniRef50_Q8R9D4 Cluster: Response regulators consisting of a Che... 31 6.0
UniRef50_Q5YQ28 Cluster: Putative uncharacterized protein; n=2; ... 31 6.0
UniRef50_Q9N675 Cluster: Zyx102 protein; n=5; Sophophora|Rep: Zy... 31 6.0
UniRef50_UPI0000382609 Cluster: COG0454: Histone acetyltransfera... 30 7.9
UniRef50_A7C6V4 Cluster: Sti; n=1; Beggiatoa sp. PS|Rep: Sti - B... 30 7.9
UniRef50_Q9W003 Cluster: CG16757-PA; n=4; Sophophora|Rep: CG1675... 30 7.9
UniRef50_Q6CNZ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 30 7.9
UniRef50_Q5AIC7 Cluster: Putative uncharacterized protein; n=1; ... 30 7.9
>UniRef50_Q5FGN3 Cluster: Single-stranded-DNA-specific exonuclease
recJ; n=12; Rickettsiales|Rep:
Single-stranded-DNA-specific exonuclease recJ -
Ehrlichia ruminantium (strain Gardel)
Length = 590
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 1 MVGRLLAYEMRTVTQISTYLHPTLRNDFRQPEHMLSAKEMVHR 43
+V R+L+ + +IS +L+PTL++ P HML + V+R
Sbjct: 46 IVARILSARKINIEEISNFLYPTLKSSLPNPFHMLDMDKAVYR 88
>UniRef50_Q5BF87 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 722
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 41 VHRELGNLLKEFSTLALLSEQPEKTTNN-FKKPGIL 75
+H L +L K S L L S P+ +T+N FK+PG+L
Sbjct: 379 LHCSLCHLAKYISILGLTSNDPDSSTSNVFKRPGVL 414
>UniRef50_A5BRY8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 319
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 3 GRLLAYEMRTVTQISTYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEF 52
G++L+Y T+ + ++ P+ R FR P H +++H EL L +F
Sbjct: 62 GKILSYVFTTIHKYPLFMTPSCRTAFRLPAH--GNAQVLHEELNLLWPDF 109
>UniRef50_O95382 Cluster: Mitogen-activated protein kinase kinase
kinase 6; n=23; Theria|Rep: Mitogen-activated protein
kinase kinase kinase 6 - Homo sapiens (Human)
Length = 1288
Score = 32.3 bits (70), Expect = 2.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 1 MVGRLLAYEMRTVTQISTYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLS 59
+VGRL T T Y T+R D RQ S ++ +EL L + ++ LLS
Sbjct: 216 LVGRLARLLEATPTDSCGYFRETIRRDIRQARERFSGPQL-RQELARLQRRLDSVELLS 273
>UniRef50_A7SUD1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 554
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 61 QPEKTTNNFKKPGILDFLHSRKRDIPNATRHGGHSEYSANVY 102
Q E+ F+ PG + H K IPNAT G NVY
Sbjct: 199 QLEEVKTEFRGPGGVKLSHLMKGQIPNATFQAGDKAQHENVY 240
>UniRef50_A1WC34 Cluster: DnaK-related protein; n=3;
Comamonadaceae|Rep: DnaK-related protein - Acidovorax
sp. (strain JS42)
Length = 956
Score = 31.5 bits (68), Expect = 3.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 19 YLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEK 64
+LH TLR D+R EH L A + R G+ ++ AL +E EK
Sbjct: 871 FLHATLREDWRHNEHALFAAVQIARMTGDRARDLPD-ALRTEVLEK 915
>UniRef50_Q7QP02 Cluster: GLP_244_16200_12619; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_244_16200_12619 - Giardia lamblia
ATCC 50803
Length = 1193
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 49 LKEFSTLALLSEQPEKTTNNFKKPGILDFLHSRKR 83
L EF T LL+EQPE+T P +HS KR
Sbjct: 224 LDEFETCDLLAEQPEETYEETHSPSDSLVMHSSKR 258
>UniRef50_Q8F0W3 Cluster: Transcription elongation factor; n=4;
Leptospira|Rep: Transcription elongation factor -
Leptospira interrogans
Length = 930
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 32 EHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPGILDFLHSRKRDIPNATRH 91
E +LS+K+ EL +LK F L++ +K T K D LH +I H
Sbjct: 652 EWLLSSKQEERLEL--ILKVFRMFKPLTKIEDKGTK--LKNACKDILHGNDDEILREAIH 707
Query: 92 GGHSEYSANVY 102
G+SEY +Y
Sbjct: 708 AGNSEYIRKLY 718
>UniRef50_UPI00006CB7A2 Cluster: hypothetical protein
TTHERM_00349050; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00349050 - Tetrahymena
thermophila SB210
Length = 1368
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 21 HPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPG 73
H +N QP+++ K+ EL LLKE + + QPE KK G
Sbjct: 711 HENSQNSIHQPQNL--QKKFQDEELEELLKEIEEINIDDMQPEVVVEKLKKLG 761
>UniRef50_Q8R9D4 Cluster: Response regulators consisting of a
CheY-like receiver domain and a HTH DNA-binding domain;
n=6; Bacteria|Rep: Response regulators consisting of a
CheY-like receiver domain and a HTH DNA-binding domain -
Thermoanaerobacter tengcongensis
Length = 208
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 10 MRTVTQISTYLHPTLRNDFRQPEHMLSAKEMVHREL--------GNLLKEFSTLALLSEQ 61
+RT+ Y+HP+L + L KE+ RE+ G KE + LSE+
Sbjct: 115 VRTIYNGGVYIHPSLMQEIEDSNEELLRKELTPREIEILKLLSQGYSNKEIAQKLFLSEK 174
Query: 62 PEK--TTNNFKKPGILD 76
K N F+K G+ D
Sbjct: 175 TVKNHVYNIFRKLGVKD 191
>UniRef50_Q5YQ28 Cluster: Putative uncharacterized protein; n=2;
Actinomycetales|Rep: Putative uncharacterized protein -
Nocardia farcinica
Length = 383
Score = 30.7 bits (66), Expect = 6.0
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 43 RELGNLLKEFSTLALLSEQPEKTTNNFKKPGILDFLHSRKRDIPNATRH 91
R + L E ST P + T P +L+ + +R ++P+A RH
Sbjct: 27 RAVRELADEISTTLARLPGPARHTTTLTDPALLELIDARAGELPDAVRH 75
>UniRef50_Q9N675 Cluster: Zyx102 protein; n=5; Sophophora|Rep:
Zyx102 protein - Drosophila melanogaster (Fruit fly)
Length = 585
Score = 30.7 bits (66), Expect = 6.0
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 26 NDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNF 69
N F +P +K +++ LG++ KE TL LL+++ + + + +
Sbjct: 154 NSFTKPLSKTLSKSLIYSNLGSVRKEIETLELLTDETKISASTY 197
>UniRef50_UPI0000382609 Cluster: COG0454: Histone acetyltransferase
HPA2 and related acetyltransferases; n=1;
Magnetospirillum magnetotacticum MS-1|Rep: COG0454:
Histone acetyltransferase HPA2 and related
acetyltransferases - Magnetospirillum magnetotacticum
MS-1
Length = 149
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 12 TVTQISTYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQP 62
T+ + +HP R DF E L +E R LG L+K + AL +++P
Sbjct: 55 TLAAFTVLVHPRGREDFAIQEDTLVLREHRGRRLGMLVKVANLDALAAQRP 105
>UniRef50_A7C6V4 Cluster: Sti; n=1; Beggiatoa sp. PS|Rep: Sti -
Beggiatoa sp. PS
Length = 114
Score = 30.3 bits (65), Expect = 7.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 13 VTQISTYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLK 50
+TQIST L P L N F ++++ KE +E LK
Sbjct: 11 ITQISTRLSPVLSNSFLIDGNVITNKESFFKEFAKKLK 48
>UniRef50_Q9W003 Cluster: CG16757-PA; n=4; Sophophora|Rep: CG16757-PA
- Drosophila melanogaster (Fruit fly)
Length = 2145
Score = 30.3 bits (65), Expect = 7.9
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 12 TVTQISTYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKK 71
T T ST T R+D +PE + E R L NLL +T + Q E+ N +
Sbjct: 1032 TTTTPSTATTATTRHDDDEPEWLRDVLEAPKRSLENLLITSATSSRAPGQREELENGYD- 1090
Query: 72 PGILDFLHSRKRDIPNATRHGGHSEYSANV 101
LH + D+ GG S + + V
Sbjct: 1091 ------LHEKHSDLNQTYITGGESLHESIV 1114
>UniRef50_Q6CNZ7 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 596
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 41 VHRELGNLLKEFSTLALLSEQPEKTTN-NFKKPGILDFLHSRKRDIPNATRHGGHS 95
VH +L ++ KE+ ++ LSE E T N N P +D S+ +++ N H+
Sbjct: 192 VHSDLSDVSKEYQYISNLSELQELTGNVNDPLPDYVDSQFSQLQELTNLAGQSNHN 247
>UniRef50_Q5AIC7 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 830
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 24 LRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPGILDFLHSRKR 83
L + P+H L +E+V + NL ++ + ++ +KTT+N +F SR
Sbjct: 450 LDTTYMSPKHNLPKQELVCEIMANLFQDLIQQEINKDEQKKTTSNLFSNWFGNFTQSRIT 509
Query: 84 D 84
D
Sbjct: 510 D 510
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.133 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,482,022
Number of Sequences: 1657284
Number of extensions: 3952715
Number of successful extensions: 8955
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8946
Number of HSP's gapped (non-prelim): 18
length of query: 102
length of database: 575,637,011
effective HSP length: 79
effective length of query: 23
effective length of database: 444,711,575
effective search space: 10228366225
effective search space used: 10228366225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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