GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000887-TA|BGIBMGA000887-PA|undefined
         (102 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   1.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   2.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   2.9  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    21   8.9  

>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 26  NDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPGIL 75
           +D  +PE+    + +VH +L   + +++ +AL+         NF +P  L
Sbjct: 203 DDGAEPENYDILRFIVHPDLKRSVGKYNDIALIQLTERVIFTNFIRPACL 252


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 47  NLLKEFSTLALLSEQPEKTTNNFKKPGILDFL 78
           NL+K  S+L    + PE+   +FKK   +D L
Sbjct: 888 NLIKSSSSLFDRFDHPEEIMRDFKKGVQMDAL 919


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 47  NLLKEFSTLALLSEQPEKTTNNFKKPGILDFL 78
           NL+K  S+L    + PE+   +FKK   +D L
Sbjct: 889 NLIKSSSSLFDRFDHPEEIMRDFKKGVQMDAL 920


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 40   MVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPGILD 76
            +V ++  ++L+    L LL    EK    FK+  +LD
Sbjct: 1676 LVDQKNNSVLEVHQVLQLLDTHVEKLDRLFKEFNVLD 1712


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,754
Number of Sequences: 2123
Number of extensions: 3965
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 102
length of database: 516,269
effective HSP length: 55
effective length of query: 47
effective length of database: 399,504
effective search space: 18776688
effective search space used: 18776688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)