Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000887-TA|BGIBMGA000887-PA|undefined
(102 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 28 1.0
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 28 1.0
AF016654-3|AAB66030.1| 348|Caenorhabditis elegans Hypothetical ... 28 1.4
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 28 1.4
AC024794-2|AAK68498.1| 618|Caenorhabditis elegans Hypothetical ... 28 1.4
AF022972-10|AAC48233.2| 523|Caenorhabditis elegans Udp-glucuron... 27 2.4
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 26 5.5
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 26 5.5
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 26 5.5
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 26 5.5
Z81015-6|CAB02661.1| 342|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr... 25 7.2
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein. 25 7.2
AL032632-3|CAA21583.1| 199|Caenorhabditis elegans Hypothetical ... 25 7.2
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ... 25 7.2
AF014940-2|AAB63934.1| 232|Caenorhabditis elegans Hypothetical ... 25 9.6
>Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical
protein C45B11.1b protein.
Length = 520
Score = 28.3 bits (60), Expect = 1.0
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 13 VTQISTYLHPTLRNDFRQPEHMLSAKEMVHREL--GNLLKEFSTLALLSEQPEKTTNNFK 70
V+ + Y HP + F H++ + V E G L + T ++E P+ T + +
Sbjct: 275 VSILRQYQHPNIVRFFSS--HLVDDELWVVMEFMEGGSLTDIVTATRMTE-PQIATISRQ 331
Query: 71 KPGILDFLHSRK 82
G LDFLH+RK
Sbjct: 332 VLGALDFLHARK 343
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 28.3 bits (60), Expect = 1.0
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 13 VTQISTYLHPTLRNDFRQPEHMLSAKEMVHREL--GNLLKEFSTLALLSEQPEKTTNNFK 70
V+ + Y HP + F H++ + V E G L + T ++E P+ T + +
Sbjct: 277 VSILRQYQHPNIVRFFSS--HLVDDELWVVMEFMEGGSLTDIVTATRMTE-PQIATISRQ 333
Query: 71 KPGILDFLHSRK 82
G LDFLH+RK
Sbjct: 334 VLGALDFLHARK 345
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 28.3 bits (60), Expect = 1.0
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 13 VTQISTYLHPTLRNDFRQPEHMLSAKEMVHREL--GNLLKEFSTLALLSEQPEKTTNNFK 70
V+ + Y HP + F H++ + V E G L + T ++E P+ T + +
Sbjct: 277 VSILRQYQHPNIVRFFSS--HLVDDELWVVMEFMEGGSLTDIVTATRMTE-PQIATISRQ 333
Query: 71 KPGILDFLHSRK 82
G LDFLH+RK
Sbjct: 334 VLGALDFLHARK 345
>AF016654-3|AAB66030.1| 348|Caenorhabditis elegans Hypothetical
protein C17A2.4 protein.
Length = 348
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 28 FRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKT 65
F EH LS+ LGN + EF++L LSE+ +T
Sbjct: 23 FNSTEHFLSSNLASPSRLGNHIFEFASLFGLSERLHRT 60
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 24 LRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPGILDFL 78
++N FR+ H+L + + ++G +++F T L SE+ + N +DFL
Sbjct: 262 IKNRFRKALHLLQHEICLEDDVGQFIRKF-TKFLNSEENQSYKNKLSNFEAVDFL 315
>AC024794-2|AAK68498.1| 618|Caenorhabditis elegans Hypothetical
protein Y48G1BM.6 protein.
Length = 618
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 24 LRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPGILDFL 78
++N FR+ H+L + + ++G +++F T L SE+ + N +DFL
Sbjct: 409 IKNRFRKALHLLQHEICLEDDVGQFIRKF-TKFLNSEENQSYKNKLSNFEAVDFL 462
>AF022972-10|AAC48233.2| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein39, isoform a
protein.
Length = 523
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 18 TYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEF 52
T+ PT+ +R + S K++VH + LKE+
Sbjct: 49 TFFTPTIVEKYRNVSYTKSTKDVVHMKPSKKLKEY 83
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 14 TQISTYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKTTNNFKKPG 73
+++S +L T R+D + PE+ E +H + N + L E+P++ ++ K
Sbjct: 1913 SKLSDHLERTKRHDCQWPENPNHPHESIHPDTPN--GPYRLKGLKQERPKRASDRSKPDL 1970
Query: 74 ILDFLHSRKRDIP 86
+ + RD P
Sbjct: 1971 VYRDFPTLHRDDP 1983
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 46 GNLLKEFSTLALLSEQPEKTTNNFKKPGILDFLHSRKRD 84
GN T A E+P K KK G L F+ RK+D
Sbjct: 695 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFM--RKKD 731
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 46 GNLLKEFSTLALLSEQPEKTTNNFKKPGILDFLHSRKRD 84
GN T A E+P K KK G L F+ RK+D
Sbjct: 695 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFM--RKKD 731
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 46 GNLLKEFSTLALLSEQPEKTTNNFKKPGILDFLHSRKRD 84
GN T A E+P K KK G L F+ RK+D
Sbjct: 645 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFM--RKKD 681
>Z81015-6|CAB02661.1| 342|Caenorhabditis elegans Hypothetical
protein C11E4.7 protein.
Length = 342
Score = 25.4 bits (53), Expect = 7.2
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 6 LAYEMRTVTQISTYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFSTLALLSEQPEKT 65
+A ++RT S YL P + R P + E++ +L+ E + PEK
Sbjct: 239 MADKIRTQHATSIYLFPGIAYG-RNPSE--DSPEVID----HLMFEIIYKGFMEVTPEKD 291
Query: 66 TNNFKKP--GILDFLHSRKRD 84
TNNF K G+L ++ + R+
Sbjct: 292 TNNFGKQVHGVLTSINCKTRN 312
>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical protein
C05C12.3 protein.
Length = 1694
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 18 TYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFS 53
T L TL+ + R+ EH + + H+E NL+ + +
Sbjct: 1453 TQLEFTLKEEIRELEHKMKNMDSRHKEQMNLMLDMN 1488
>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
Length = 1694
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 18 TYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFS 53
T L TL+ + R+ EH + + H+E NL+ + +
Sbjct: 1453 TQLEFTLKEEIRELEHKMKNMDSRHKEQMNLMLDMN 1488
>AL032632-3|CAA21583.1| 199|Caenorhabditis elegans Hypothetical
protein Y11D7A.7 protein.
Length = 199
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 58 LSEQPEKTTNNFKKPGILDFLHSRKRDIPNATRHGGHSEYSAN 100
+ E+ EK FK+ D + ++RD+ N++ G S AN
Sbjct: 103 VKEEDEKWQKIFKEMKQRDAENKKRRDLANSSSRDGSSSSIAN 145
>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1681
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 18 TYLHPTLRNDFRQPEHMLSAKEMVHRELGNLLKEFS 53
T L TL+ + R+ EH + + H+E NL+ + +
Sbjct: 1440 TQLEFTLKEEIRELEHKMKNMDSRHKEQMNLMLDMN 1475
>AF014940-2|AAB63934.1| 232|Caenorhabditis elegans Hypothetical
protein W02D7.4 protein.
Length = 232
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 36 SAKEMVHRELGNLLKEFSTLALLSEQ--PEKTTNNFKKPGI 74
+ ++HRE+G++ +F+ L + ++ T N KK I
Sbjct: 127 NVNSIIHREIGSVAPQFTRLGIATKMVTTNMTKRNLKKYNI 167
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.133 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,528,979
Number of Sequences: 27539
Number of extensions: 92033
Number of successful extensions: 231
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 222
Number of HSP's gapped (non-prelim): 17
length of query: 102
length of database: 12,573,161
effective HSP length: 71
effective length of query: 31
effective length of database: 10,617,892
effective search space: 329154652
effective search space used: 329154652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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