Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000886-TA|BGIBMGA000886-PA|IPR006629|LPS-induced tumor
necrosis factor alpha factor
(129 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 73 4e-13
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 73 4e-13
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 73 4e-13
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 73 4e-13
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 73 4e-13
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 73 4e-13
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 62 5e-10
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 62 5e-10
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 62 5e-10
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 62 5e-10
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 62 5e-10
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 54 2e-07
AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated prot... 31 1.1
AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated prot... 31 1.1
BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group... 30 2.0
AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein. 30 2.0
BC052297-1|AAH52297.1| 144|Homo sapiens Similar to RIKEN cDNA 2... 30 2.6
U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ p... 29 3.5
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 3.5
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 29 3.5
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 3.5
D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding p... 29 3.5
AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,... 29 3.5
AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,... 29 3.5
AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,... 29 3.5
AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,... 29 3.5
AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger p... 29 3.5
J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide acetyltr... 29 6.1
BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein. 29 6.1
BC093406-1|AAH93406.1| 581|Homo sapiens LAMA3 protein protein. 29 6.1
BC033663-1|AAH33663.1| 401|Homo sapiens Unknown (protein for IM... 29 6.1
BC012077-1|AAH12077.1| 1072|Homo sapiens ring finger protein 31 ... 29 6.1
AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice ... 29 6.1
AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice ... 29 6.1
AY256461-1|AAP12522.1| 921|Homo sapiens zinc in-between-ring-fi... 29 6.1
AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix pr... 29 6.1
AF005258-1|AAC51867.1| 1486|Homo sapiens laminin alpha 3b chain ... 29 6.1
AB265810-1|BAF35583.1| 1072|Homo sapiens ubiquitin ligase protein. 29 6.1
AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain ... 29 6.1
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 28 8.0
U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Fac... 28 8.0
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 28 8.0
M73077-1|AAA58618.1| 835|Homo sapiens glucocorticoid receptor r... 28 8.0
BC131565-1|AAI31566.1| 749|Homo sapiens GRLF1 protein protein. 28 8.0
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 28 8.0
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 28 8.0
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 28 8.0
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 28 8.0
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 28 8.0
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 28 8.0
AF159851-1|AAF80386.1| 1514|Homo sapiens Rho GAP p190-A protein. 28 8.0
AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein. 28 8.0
AB051509-1|BAB21813.2| 1499|Homo sapiens KIAA1722 protein protein. 28 8.0
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 72.5 bits (170), Expect = 4e-13
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-CACIPYCTDSCKDANHYCPN 119
P CPSC+ IV+++ + T L LCL+GC C IP+C D+ +D +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 120 CNAYIGSYNR 129
C A +G+Y R
Sbjct: 151 CRALLGTYKR 160
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 40 VTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC-C 98
+ P+ VTV+ + P T CP C AI T++ + + C +GC
Sbjct: 116 LVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDL 175
Query: 99 PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 129
C IP + KD H CP+C AYI +Y R
Sbjct: 176 GCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 40 VTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC-C 98
+ P+ VTV+ + P T CP C AI T++ + + C +GC
Sbjct: 116 LVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAIATKISYEIGLMNFVLGFFCCFMGCDL 175
Query: 99 PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 129
C IP + KD H CP+C AYI +Y R
Sbjct: 176 GCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 40 VTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC-C 98
+ P+ VTV+ + P T CP C AI T++ + + C +GC
Sbjct: 33 LVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDL 92
Query: 99 PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 129
C IP + KD H CP+C AYI +Y R
Sbjct: 93 GCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 123
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 40 VTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC-C 98
+ P+ VTV+ + P T CP C AI T++ + + C +GC
Sbjct: 116 LVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDL 175
Query: 99 PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 129
C IP + KD H CP+C AYI +Y R
Sbjct: 176 GCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 40 VTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC-C 98
+ P+ VTV+ + P T CP C AI T++ + + C +GC
Sbjct: 116 LVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDL 175
Query: 99 PCACIPYCTDSCKDANHYCPNCNAYIGSYNR 129
C IP + KD H CP+C AYI +Y R
Sbjct: 176 GCCLIPCLINDFKDVTHTCPSCKAYIYTYKR 206
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 40 VTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGC-C 98
+ P+ VTV+ + P T CP C AI T++ + + C +GC
Sbjct: 116 LVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDL 175
Query: 99 PCACIPYCTDSCKDANHYCPNCNA 122
C IP + KD H CP+C A
Sbjct: 176 GCCLIPCLINDFKDVTHTCPSCKA 199
>AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated protein
5-11 protein.
Length = 221
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 93 CLIGCC-PCACIPYCTDSCKDANHYCPNC 120
C CC PC+C C SC ++ Y P C
Sbjct: 178 CQSSCCKPCSCFSGCGSSCCQSSCYKPCC 206
>AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 93 CLIGCC-PCACIPYCTDSCKDANHYCPNC 120
C CC PC+C C SC ++ Y P C
Sbjct: 178 CQSSCCKPCSCFSGCGSSCCQSSCYKPCC 206
>BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group
box family member 4 protein.
Length = 621
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 33 LYPAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIV 74
L PA PS TP+PP TV PA P P + P+ S +IV
Sbjct: 305 LDPAPPSQTPSPP-PMATVDPA---SPAPASIEPPALSPSIV 342
>AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein.
Length = 629
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 33 LYPAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIV 74
L PA PS TP+PP TV PA P P + P+ S +IV
Sbjct: 313 LDPAPPSQTPSPP-PMATVDPA---SPAPASIEPPALSPSIV 350
>BC052297-1|AAH52297.1| 144|Homo sapiens Similar to RIKEN cDNA
2310002J15 gene protein.
Length = 144
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 37 VPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIG 96
VP A Q + QQ +P N S A +T PV + A C
Sbjct: 63 VPGPKGAKGNQGAAPIQNQQAWQQPGNPYSSSQRQAGLTYAGPPPVGRGDDIAHHCCCCP 122
Query: 97 CCPCA-CIPYC 106
CC C C P+C
Sbjct: 123 CCHCCHCPPFC 133
>U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ
protein.
Length = 1719
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 108 DSCKDANHYCPNCN---AYIGSYNR 129
++C+ ++H CP CN YIGS N+
Sbjct: 1449 NACESSSHICPYCNREFTYIGSLNK 1473
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 35 PAVPSVTP-APPQQFVTVVPAQQMGPEPTNTSCP 67
P+ P+ TP PP T+ P P PT T+ P
Sbjct: 914 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 947
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 35 PAVPSVTP-APPQQFVTVVPAQQMGPEPTNTSCP 67
P+ P+ TP PP T+ P P PT T+ P
Sbjct: 993 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1026
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 35 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTS 65
P+ P+ TP+PP T +P PT T+
Sbjct: 774 PSPPTTTPSPPPTTTTTLPPTTTPSPPTTTT 804
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 35 PAVPSVTP-APPQQFVTVVPAQQMGPEPTNTSCP 67
P+ P+ TP PP T+ P P PT T+ P
Sbjct: 197 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 230
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 35 PAVPSVTP-APPQQFVTVVPAQQMGPEPTNTSCP 67
P+ P+ TP PP T+ P P PT T+ P
Sbjct: 276 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 309
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 35 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTS 65
P+ P+ TP+PP T +P PT T+
Sbjct: 57 PSPPTTTPSPPPTSTTTLPPTTTPSPPTTTT 87
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 35 PAVPSVTP-APPQQFVTVVPAQQMGPEPTNTSCP 67
P+ P+ TP PP T+ P P PT T+ P
Sbjct: 1539 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1572
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 35 PAVPSVTP-APPQQFVTVVPAQQMGPEPTNTSCP 67
P+ P+ TP PP T+ P P PT T+ P
Sbjct: 1618 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1651
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 35 PAVPSVTPAPPQQFVTVVPAQQMGPEPTNTS 65
P+ P+ TP+PP T +P PT T+
Sbjct: 1399 PSPPTTTPSPPPTTTTTLPPTTTPSPPTTTT 1429
>D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding
protein protein.
Length = 1482
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 108 DSCKDANHYCPNCN---AYIGSYNR 129
++C+ ++H CP CN YIGS N+
Sbjct: 1248 NACESSSHICPYCNREFTYIGSLNK 1272
>AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1718
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 108 DSCKDANHYCPNCN---AYIGSYNR 129
++C+ ++H CP CN YIGS N+
Sbjct: 1448 NACESSSHICPYCNREFTYIGSLNK 1472
>AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1540
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 108 DSCKDANHYCPNCN---AYIGSYNR 129
++C+ ++H CP CN YIGS N+
Sbjct: 1306 NACESSSHICPYCNREFTYIGSLNK 1330
>AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1481
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 108 DSCKDANHYCPNCN---AYIGSYNR 129
++C+ ++H CP CN YIGS N+
Sbjct: 1247 NACESSSHICPYCNREFTYIGSLNK 1271
>AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2, with
ZNF domain protein.
Length = 1718
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 108 DSCKDANHYCPNCN---AYIGSYNR 129
++C+ ++H CP CN YIGS N+
Sbjct: 1448 NACESSSHICPYCNREFTYIGSLNK 1472
>AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger
protein 2 variant protein.
Length = 1576
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 108 DSCKDANHYCPNCN---AYIGSYNR 129
++C+ ++H CP CN YIGS N+
Sbjct: 1306 NACESSSHICPYCNREFTYIGSLNK 1330
>J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide
acetyltransferase protein.
Length = 613
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 33 LYPAVPSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTK 84
L P VP TP PP V P Q + P P+ T CP+ A RV P+ K
Sbjct: 281 LKPQVPPPTP-PPVAAVPPTP-QPLAPTPS-TPCPATPAGPKGRVFVDPLAK 329
>BC131820-1|AAI31821.1| 1976|Homo sapiens FRAS1 protein protein.
Length = 1976
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 52 VPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFA-LLLCLIGCCPCACIPYCTDSC 110
VP G +C C ++ T P + + L+L G C C P
Sbjct: 843 VPDCPSGYYAERGACKKCHSSCRTCQGRGPFSCSSCDTNLVLSHTGTCSTTCFP---GHY 899
Query: 111 KDANHYCPNCNAYIGS 126
D NH C CN + GS
Sbjct: 900 LDDNHVCQPCNTHCGS 915
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 60 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 119
+P NT C SC + P K LF C P + + T++CK+ + C
Sbjct: 907 QPCNTHCGSCDSQASCTSCRDP-NKVLLFGECQ-YESCAPQYYLDFSTNTCKECDWSCSA 964
Query: 120 CN 121
C+
Sbjct: 965 CS 966
>BC093406-1|AAH93406.1| 581|Homo sapiens LAMA3 protein protein.
Length = 581
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 96 GCCPCACIPYCTDSCKDANHYC 117
GC PC+C P D C+ + C
Sbjct: 422 GCIPCSCDPEHADGCEQGSGRC 443
>BC033663-1|AAH33663.1| 401|Homo sapiens Unknown (protein for
IMAGE:4449486) protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 96 GCCPCACIPYCTDSCKDANHYC 117
GC PC+C P D C+ + C
Sbjct: 241 GCIPCSCDPEHADGCEQGSGRC 262
>BC012077-1|AAH12077.1| 1072|Homo sapiens ring finger protein 31
protein.
Length = 1072
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 38 PSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHV 80
P TP+ P T P G P CPSC A+ DH+
Sbjct: 203 PLTTPSVPGS--TPGPCFLCGSAPGTLHCPSCKQALCPACDHL 243
>AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice
variant b2 protein.
Length = 3277
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 96 GCCPCACIPYCTDSCKDANHYC 117
GC PC+C P D C+ + C
Sbjct: 422 GCIPCSCDPEHADGCEQGSGRC 443
>AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice
variant b1 protein.
Length = 3333
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 96 GCCPCACIPYCTDSCKDANHYC 117
GC PC+C P D C+ + C
Sbjct: 422 GCIPCSCDPEHADGCEQGSGRC 443
>AY256461-1|AAP12522.1| 921|Homo sapiens zinc
in-between-ring-finger ubiquitin-associated domain
protein.
Length = 921
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 38 PSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHV 80
P TP+ P T P G P CPSC A+ DH+
Sbjct: 52 PLTTPSVPGS--TPGPCFLCGSAPGTLHCPSCKQALCPACDHL 92
>AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix
protein protein.
Length = 4007
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Query: 52 VPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFA-LLLCLIGCCPCACIPYCTDSC 110
VP G +C C ++ T P + + L+L G C C P
Sbjct: 843 VPDCPSGYYAERGACKKCHSSCRTCQGRGPFSCSSCDTNLVLSHTGTCSTTCFP---GHY 899
Query: 111 KDANHYCPNCNAYIGS 126
D NH C CN + GS
Sbjct: 900 LDDNHVCQPCNTHCGS 915
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 60 EPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPYCTDSCKDANHYCPN 119
+P NT C SC + P K LF C P + + T++CK+ + C
Sbjct: 907 QPCNTHCGSCDSQASCTSCRDP-NKVLLFGECQ-YESCAPQYYLDFSTNTCKECDWSCSA 964
Query: 120 CN 121
C+
Sbjct: 965 CS 966
>AF005258-1|AAC51867.1| 1486|Homo sapiens laminin alpha 3b chain
protein.
Length = 1486
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 96 GCCPCACIPYCTDSCKDANHYC 117
GC PC+C P D C+ + C
Sbjct: 386 GCIPCSCDPEHADGCEQGSGRC 407
>AB265810-1|BAF35583.1| 1072|Homo sapiens ubiquitin ligase protein.
Length = 1072
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 38 PSVTPAPPQQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHV 80
P TP+ P T P G P CPSC A+ DH+
Sbjct: 203 PLTTPSVPGS--TPGPCFLCGSAPGTLHCPSCKQALCPACDHL 243
>AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain
protein.
Length = 3333
Score = 28.7 bits (61), Expect = 6.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 96 GCCPCACIPYCTDSCKDANHYC 117
GC PC+C P D C+ + C
Sbjct: 422 GCIPCSCDPEHADGCEQGSGRC 443
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Factor
protein.
Length = 228
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIG 96
P CPSC+ IV+++ + T L LCL+G
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLG 126
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>M73077-1|AAA58618.1| 835|Homo sapiens glucocorticoid receptor
repression factor 1 protein.
Length = 835
Score = 28.3 bits (60), Expect = 8.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 61 PTNTSCPSCSAAIVTRVDHV 80
PT +CPSC A + +++H+
Sbjct: 168 PTKETCPSCPACVDAKIEHL 187
>BC131565-1|AAI31566.1| 749|Homo sapiens GRLF1 protein protein.
Length = 749
Score = 28.3 bits (60), Expect = 8.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 61 PTNTSCPSCSAAIVTRVDHV 80
PT +CPSC A + +++H+
Sbjct: 554 PTKETCPSCPACVDAKIEHL 573
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 97 CCPCACIPYCTDSCKDANHYCPNCNAYIG 125
C PC C + +SC D C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AF159851-1|AAF80386.1| 1514|Homo sapiens Rho GAP p190-A protein.
Length = 1514
Score = 28.3 bits (60), Expect = 8.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 61 PTNTSCPSCSAAIVTRVDHV 80
PT +CPSC A + +++H+
Sbjct: 555 PTKETCPSCPACVDAKIEHL 574
>AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein.
Length = 228
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 61 PTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIG 96
P CPSC+ IV+++ + T L LCL+G
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLG 126
>AB051509-1|BAB21813.2| 1499|Homo sapiens KIAA1722 protein protein.
Length = 1499
Score = 28.3 bits (60), Expect = 8.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 61 PTNTSCPSCSAAIVTRVDHV 80
PT +CPSC A + +++H+
Sbjct: 554 PTKETCPSCPACVDAKIEHL 573
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.135 0.461
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,944,603
Number of Sequences: 224733
Number of extensions: 782102
Number of successful extensions: 3664
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 3527
Number of HSP's gapped (non-prelim): 143
length of query: 129
length of database: 73,234,838
effective HSP length: 82
effective length of query: 47
effective length of database: 54,806,732
effective search space: 2575916404
effective search space used: 2575916404
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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