GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000885-TA|BGIBMGA000885-PA|undefined
         (136 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    22   6.3  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    22   6.3  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 11/39 (28%), Positives = 15/39 (38%)

Query: 55  QQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLC 93
           Q  G  PT  SC SC   +  R  H  + +       +C
Sbjct: 890 QLTGTFPTLYSCVSCHKTVSNRWHHANIHRPQSHECPVC 928


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 1/22 (4%)

Query: 93  CLIGCCPCACIPTARTPAKMQT 114
           CL  C P  C+P  R P   QT
Sbjct: 150 CLSKCSPTKCVPFCR-PFSGQT 170


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.133    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,099
Number of Sequences: 2123
Number of extensions: 3507
Number of successful extensions: 38
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36
Number of HSP's gapped (non-prelim): 2
length of query: 136
length of database: 516,269
effective HSP length: 58
effective length of query: 78
effective length of database: 393,135
effective search space: 30664530
effective search space used: 30664530
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)