Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000885-TA|BGIBMGA000885-PA|undefined
(136 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 0.67
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 30 0.67
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 30 0.67
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 30 0.67
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 30 0.67
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 28 2.0
AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical ... 28 2.7
Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 27 6.2
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 27 6.2
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 27 6.2
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 27 6.2
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 27 6.2
U00067-1|AAK20074.1| 305|Caenorhabditis elegans Hypothetical pr... 27 6.2
AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel... 27 6.2
AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologou... 27 6.2
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 27 6.2
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 27 6.2
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 26 8.2
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 56 QMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIP 104
++ P T CP C IVTR V T +F L L GC C +P
Sbjct: 67 RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLP 115
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 107 RTPAKMQTITVRIAT-RTLEATIAKYF 132
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 107 RTPAKMQTITVRIAT-RTLEATIAKYF 132
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 429 RRPAQTQTFPLQLETGQTIECTVAKYF 455
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 107 RTPAKMQTITVRIAT-RTLEATIAKYF 132
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 437 RRPAQTQTFPLQLETGQTIECTVAKYF 463
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 107 RTPAKMQTITVRIAT-RTLEATIAKYF 132
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 315 RRPAQTQTFPLQLETGQTIECTVAKYF 341
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 107 RTPAKMQTITVRIAT-RTLEATIAKYF 132
R PA+ QT +++ T +T+E T+AKYF
Sbjct: 334 RRPAQTQTFPLQLETGQTIECTVAKYF 360
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 28.3 bits (60), Expect = 2.0
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Query: 46 QQFVTVVPAQQMGPEPTNTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCP-C-ACI 103
QQF V QQ P+ T +S P C T PV + C P C C
Sbjct: 182 QQFAPVCQ-QQCAPQCTISSAPQCQQCQTTCQQFAPVCQQQ--CAPQCQQPSAPQCQQCQ 238
Query: 104 PTARTPAKMQTITVRIATRTLEATIAK 130
++P + +I T LEA++++
Sbjct: 239 SACQSPVVAPVVAPQIVTVILEASVSQ 265
>AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical
protein F45C12.12 protein.
Length = 272
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 75 TRVDHVPVTKTHLFALLLCLIGCCPCACIPTARTPAKMQTITVRIATRTLEATIAKYFSW 134
+ + +P+ + L L P PT +T AK+ T+ R R + A + + W
Sbjct: 171 SEIPEIPIRDVSAEDMGLLLSTIYPDLVFPTDKTAAKLLTLANRFQMRAVTAQVEHHLLW 230
>Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical
protein K01A11.4 protein.
Length = 854
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 102 CIPTARTPAKMQTITVRIATRTLEATIAKYFSW 134
C+P AR A + V + L TI YF+W
Sbjct: 355 CVPLARFIAHITMYLVFLIAAILRPTIGFYFAW 387
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 88 FALLLCLIGCCPCAC 102
F+LLL L+ CC C C
Sbjct: 450 FSLLLLLLFCCACCC 464
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 88 FALLLCLIGCCPCAC 102
F+LLL L+ CC C C
Sbjct: 476 FSLLLLLLFCCACCC 490
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 88 FALLLCLIGCCPCAC 102
F+LLL L+ CC C C
Sbjct: 450 FSLLLLLLFCCACCC 464
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 88 FALLLCLIGCCPCAC 102
F+LLL L+ CC C C
Sbjct: 476 FSLLLLLLFCCACCC 490
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 88 FALLLCLIGCCPCAC 102
F+LLL L+ CC C C
Sbjct: 317 FSLLLLLLFCCACCC 331
>U00067-1|AAK20074.1| 305|Caenorhabditis elegans Hypothetical
protein F54E7.5 protein.
Length = 305
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 63 NTSCPSCSAAIVTRVDHVPVTKTHLFALLLCLIGCCPCACIPT 105
+T CP C D K+ +F+ LI C C+ T
Sbjct: 158 DTECPYCPPPTTIAPDTFTANKSFIFSTQHLLIACLILLCLTT 200
>AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel
protein protein.
Length = 854
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 102 CIPTARTPAKMQTITVRIATRTLEATIAKYFSW 134
C+P AR A + V + L TI YF+W
Sbjct: 355 CVPLARFIAHITMYLVFLIAAILRPTIGFYFAW 387
>AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 854
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 102 CIPTARTPAKMQTITVRIATRTLEATIAKYFSW 134
C+P AR A + V + L TI YF+W
Sbjct: 355 CVPLARFIAHITMYLVFLIAAILRPTIGFYFAW 387
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 88 FALLLCLIGCCPCAC 102
F+LLL L+ CC C C
Sbjct: 450 FSLLLLLLFCCACCC 464
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 88 FALLLCLIGCCPCAC 102
F+LLL L+ CC C C
Sbjct: 476 FSLLLLLLFCCACCC 490
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 26.2 bits (55), Expect = 8.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 51 VVPAQQMGP--EPTNTSCPSCSAAIVTRVDHVP--VTKTHLFALLLCLIGCCPCACI 103
++ +M P EP CP C+ + TRV+ + T LF L C C+
Sbjct: 54 IIVGTKMAPSFEPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVFFPLLCCFCL 110
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.133 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,571,164
Number of Sequences: 27539
Number of extensions: 76663
Number of successful extensions: 346
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 333
Number of HSP's gapped (non-prelim): 20
length of query: 136
length of database: 12,573,161
effective HSP length: 74
effective length of query: 62
effective length of database: 10,535,275
effective search space: 653187050
effective search space used: 653187050
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 55 (26.2 bits)
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