GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000884-TA|BGIBMGA000884-PA|IPR006629|LPS-induced tumor
necrosis factor alpha factor, IPR007087|Zinc finger, C2H2-type
         (164 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   1.6  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   2.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   2.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   2.8  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   4.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   4.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.4  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 128 CLIGCWPCACIPYC 141
           CL  C P  C+P+C
Sbjct: 150 CLSKCSPTKCVPFC 163


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 125 LILCLIGCWPCACI 138
           L+LCL+  W C C+
Sbjct: 250 LVLCLLVPWTCICL 263


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 125 LILCLIGCWPCACI 138
           L+LCL+  W C C+
Sbjct: 250 LVLCLLVPWTCICL 263


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)

Query: 131 GCWPCACIPYCMESCQNATHY 151
           GC PC C  + +E C +A+ Y
Sbjct: 493 GCTPCFCYGHTLE-CTSASGY 512


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 125 LILCLIGCWPCACIPYCMESCQNATHYCPNCHAY 158
           L +C I    C C  +C+   Q+   Y P    Y
Sbjct: 899 LEICRIYVNLCECDAFCLAVSQDGRSYSPQLFEY 932


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 2  HAITHSKTGDRRTR 15
          H+I H + GD+R+R
Sbjct: 40 HSIRHGRNGDKRSR 53


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 85  TVVQARPMGPEPSSLTCPS 103
           TV+Q  P G EP + T P+
Sbjct: 360 TVLQRTPSGTEPKTPTSPT 378


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.135    0.455 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,445
Number of Sequences: 2123
Number of extensions: 5034
Number of successful extensions: 61
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 55
Number of HSP's gapped (non-prelim): 7
length of query: 164
length of database: 516,269
effective HSP length: 59
effective length of query: 105
effective length of database: 391,012
effective search space: 41056260
effective search space used: 41056260
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 45 (22.2 bits)