Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000884-TA|BGIBMGA000884-PA|IPR006629|LPS-induced tumor
necrosis factor alpha factor, IPR007087|Zinc finger, C2H2-type
(164 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 78 2e-14
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 78 2e-14
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 78 2e-14
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 78 2e-14
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 78 2e-14
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 78 2e-14
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 60 5e-09
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 60 5e-09
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 60 5e-09
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 60 5e-09
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 60 5e-09
AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open read... 52 1e-06
U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Fac... 37 0.029
AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein. 37 0.029
BT007055-1|AAP35704.1| 445|Homo sapiens myosin regulatory light... 31 1.9
BC002860-1|AAH02860.1| 445|Homo sapiens myosin regulatory light... 31 1.9
AL021407-5|CAI19548.1| 445|Homo sapiens myosin regulatory light... 31 1.9
AL021407-4|CAI19547.2| 264|Homo sapiens myosin regulatory light... 31 1.9
AF258586-1|AAG23789.1| 445|Homo sapiens PP5242 protein. 31 1.9
AF187016-1|AAF18974.1| 445|Homo sapiens myosin regulatory light... 31 1.9
AF006004-1|AAQ13409.1| 445|Homo sapiens BZF1 protein. 31 1.9
AF006003-1|AAQ13408.1| 445|Homo sapiens BZF1 protein. 31 1.9
BC047393-1|AAH47393.1| 261|Homo sapiens ring finger and CHY zin... 31 2.5
BC031057-1|AAH31057.1| 170|Homo sapiens RCHY1 protein protein. 31 2.5
AY888047-1|AAX78233.1| 188|Homo sapiens ring finger and CHY zin... 31 2.5
AF305424-1|AAL09356.1| 261|Homo sapiens zinc-finger protein pro... 31 2.5
AF255666-1|AAK96896.1| 261|Homo sapiens CHIMP protein. 31 2.5
AF247041-1|AAL76101.1| 261|Homo sapiens androgen receptor N-ter... 31 2.5
AB209072-1|BAD92309.1| 263|Homo sapiens RING finger and CHY zin... 31 2.5
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 30 4.4
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 30 4.4
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 4.4
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 4.4
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 4.4
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 4.4
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 4.4
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 4.4
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 77.8 bits (183), Expect = 2e-14
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP-CACIPYCMESCQNATHYCPN 154
P + CPSCN +IV+++ ++A + T L LCL+GC C IP+C+++ Q+ HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 155 CHAYIGTY 162
C A +GTY
Sbjct: 151 CRALLGTY 158
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 84 VTVVQARPMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCM 142
VTV+Q P CP C I T++ ++ + C +GC C IP +
Sbjct: 125 VTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLI 184
Query: 143 ESCQNATHYCPNCHAYIGTY 162
++ TH CP+C AYI TY
Sbjct: 185 NDFKDVTHTCPSCKAYIYTY 204
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 84 VTVVQARPMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCM 142
VTV+Q P CP C I T++ ++ + C +GC C IP +
Sbjct: 125 VTVLQGEIFEGAPVQTVCPHCQQAIATKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLI 184
Query: 143 ESCQNATHYCPNCHAYIGTY 162
++ TH CP+C AYI TY
Sbjct: 185 NDFKDVTHTCPSCKAYIYTY 204
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 84 VTVVQARPMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCM 142
VTV+Q P CP C I T++ ++ + C +GC C IP +
Sbjct: 42 VTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLI 101
Query: 143 ESCQNATHYCPNCHAYIGTY 162
++ TH CP+C AYI TY
Sbjct: 102 NDFKDVTHTCPSCKAYIYTY 121
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 84 VTVVQARPMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCM 142
VTV+Q P CP C I T++ ++ + C +GC C IP +
Sbjct: 125 VTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLI 184
Query: 143 ESCQNATHYCPNCHAYIGTY 162
++ TH CP+C AYI TY
Sbjct: 185 NDFKDVTHTCPSCKAYIYTY 204
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 84 VTVVQARPMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCM 142
VTV+Q P CP C I T++ ++ + C +GC C IP +
Sbjct: 125 VTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLI 184
Query: 143 ESCQNATHYCPNCHAYIGTY 162
++ TH CP+C AYI TY
Sbjct: 185 NDFKDVTHTCPSCKAYIYTY 204
>AF131218-1|AAF26619.1| 261|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 261
Score = 51.6 bits (118), Expect = 1e-06
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 84 VTVVQARPMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGC-WPCACIPYCM 142
VTV+Q P CP C I T++ ++ + C +GC C IP +
Sbjct: 125 VTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLI 184
Query: 143 ESCQNATHYCPNCHA 157
++ TH CP+C A
Sbjct: 185 NDFKDVTHTCPSCKA 199
>U77396-1|AAB36550.1| 228|Homo sapiens LPS-Induced TNF-Alpha Factor
protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.029
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIG 131
P + CPSCN +IV+++ ++A + T L LCL+G
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLG 126
>AF010312-1|AAC39530.1| 228|Homo sapiens Pig7 protein.
Length = 228
Score = 37.1 bits (82), Expect = 0.029
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 96 PSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIG 131
P + CPSCN +IV+++ ++A + T L LCL+G
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLG 126
>BT007055-1|AAP35704.1| 445|Homo sapiens myosin regulatory light
chain interacting protein protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 350 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 409
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 410 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 438
>BC002860-1|AAH02860.1| 445|Homo sapiens myosin regulatory light
chain interacting protein protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 350 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 409
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 410 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 438
>AL021407-5|CAI19548.1| 445|Homo sapiens myosin regulatory light
chain interacting protein protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 350 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 409
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 410 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 438
>AL021407-4|CAI19547.2| 264|Homo sapiens myosin regulatory light
chain interacting protein protein.
Length = 264
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 169 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 228
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 229 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 257
>AF258586-1|AAG23789.1| 445|Homo sapiens PP5242 protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 350 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 409
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 410 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 438
>AF187016-1|AAF18974.1| 445|Homo sapiens myosin regulatory light
chain interacting protein MIR protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 350 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 409
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 410 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 438
>AF006004-1|AAQ13409.1| 445|Homo sapiens BZF1 protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 350 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 409
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 410 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 438
>AF006003-1|AAQ13408.1| 445|Homo sapiens BZF1 protein.
Length = 445
Score = 31.1 bits (67), Expect = 1.9
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 15/89 (16%)
Query: 91 PMGPEPSSLTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWP------CAC-IPYCME 143
P+ SS+ C SC + + + L +LC++ C C C C E
Sbjct: 350 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE 409
Query: 144 SCQNATHYCPNC--------HAYIGTYTN 164
SC CP C H Y+ T+T+
Sbjct: 410 SCAAQLQSCPVCRSRVEHVQHVYLPTHTS 438
>BC047393-1|AAH47393.1| 261|Homo sapiens ring finger and CHY zinc
finger domain containing 1 protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 99 LTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWPCACIPYCMESCQNAT-----HYCP 153
L P C+ + R+ HD + L + + C C I + ++C+ + +YC
Sbjct: 29 LKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCD 88
Query: 154 NCHAY 158
CH +
Sbjct: 89 ICHLF 93
>BC031057-1|AAH31057.1| 170|Homo sapiens RCHY1 protein protein.
Length = 170
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 99 LTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWPCACIPYCMESCQNAT-----HYCP 153
L P C+ + R+ HD + L + + C C I + ++C+ + +YC
Sbjct: 29 LKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCD 88
Query: 154 NCHAY 158
CH +
Sbjct: 89 ICHLF 93
>AY888047-1|AAX78233.1| 188|Homo sapiens ring finger and CHY zinc
finger domain containing 1 variant 2 protein.
Length = 188
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 99 LTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWPCACIPYCMESCQNAT-----HYCP 153
L P C+ + R+ HD + L + + C C I + ++C+ + +YC
Sbjct: 29 LKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCD 88
Query: 154 NCHAY 158
CH +
Sbjct: 89 ICHLF 93
>AF305424-1|AAL09356.1| 261|Homo sapiens zinc-finger protein
protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 99 LTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWPCACIPYCMESCQNAT-----HYCP 153
L P C+ + R+ HD + L + + C C I + ++C+ + +YC
Sbjct: 29 LKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCD 88
Query: 154 NCHAY 158
CH +
Sbjct: 89 ICHLF 93
>AF255666-1|AAK96896.1| 261|Homo sapiens CHIMP protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 99 LTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWPCACIPYCMESCQNAT-----HYCP 153
L P C+ + R+ HD + L + + C C I + ++C+ + +YC
Sbjct: 29 LKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCD 88
Query: 154 NCHAY 158
CH +
Sbjct: 89 ICHLF 93
>AF247041-1|AAL76101.1| 261|Homo sapiens androgen receptor
N-terminal-interacting protein protein.
Length = 261
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 99 LTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWPCACIPYCMESCQNAT-----HYCP 153
L P C+ + R+ HD + L + + C C I + ++C+ + +YC
Sbjct: 29 LKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCD 88
Query: 154 NCHAY 158
CH +
Sbjct: 89 ICHLF 93
>AB209072-1|BAD92309.1| 263|Homo sapiens RING finger and CHY zinc
finger domain containing protein 1 variant protein.
Length = 263
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 99 LTCPSCNAVIVTRVQHDASSKTHLFALILCLIGCWPCACIPYCMESCQNAT-----HYCP 153
L P C+ + R+ HD + L + + C C I + ++C+ + +YC
Sbjct: 31 LKAPCCDKLYTCRLCHDNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCD 90
Query: 154 NCHAY 158
CH +
Sbjct: 91 ICHLF 95
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 132 CWPCACIPYCMESCQNATHYCPNCHAYIG 160
C PC C + ESC + T C NC + G
Sbjct: 754 CEPCQCFGHA-ESCDDVTGECLNCKDHTG 781
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.326 0.135 0.455
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,920,648
Number of Sequences: 224733
Number of extensions: 715167
Number of successful extensions: 2884
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2839
Number of HSP's gapped (non-prelim): 44
length of query: 164
length of database: 73,234,838
effective HSP length: 84
effective length of query: 80
effective length of database: 54,357,266
effective search space: 4348581280
effective search space used: 4348581280
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -