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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000883-TA|BGIBMGA000883-PA|IPR006629|LPS-induced tumor
necrosis factor alpha factor
         (153 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537543-1|CAD97778.1|  161|Homo sapiens hypothetical protein pr...    71   1e-12
BC101969-1|AAI01970.1|  161|Homo sapiens LPS-induced TNF-alpha f...    71   1e-12
BC101402-1|AAI01403.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC101401-1|AAI01402.1|  161|Homo sapiens LPS-induced TNF-alpha f...    71   1e-12
BC096066-1|AAH96066.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC096065-1|AAH96065.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC096063-1|AAH96063.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC046154-1|AAH46154.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC039840-1|AAH39840.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC016491-1|AAH16491.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC008309-1|AAH08309.1|  161|Homo sapiens lipopolysaccharide-indu...    71   1e-12
BC000053-1|AAH00053.1|  161|Homo sapiens LITAF protein protein.        71   1e-12
AB034747-1|BAB32547.1|  161|Homo sapiens small integral membrane...    71   1e-12
DQ167023-1|AAZ94626.1|  208|Homo sapiens cell death inducing pro...    51   2e-06
CR533446-1|CAG38477.1|  208|Homo sapiens C16orf5 protein.              51   2e-06
BC007604-1|AAH07604.1|  125|Homo sapiens Unknown (protein for IM...    51   2e-06
BC002882-1|AAH02882.1|  208|Homo sapiens chromosome 16 open read...    51   2e-06
AF195661-1|AAG35583.1|  208|Homo sapiens transmembrane protein I...    51   2e-06
AF131218-1|AAF26619.1|  261|Homo sapiens chromosome 16 open read...    45   1e-04
U77396-1|AAB36550.1|  228|Homo sapiens LPS-Induced TNF-Alpha Fac...    33   0.41 
AF010312-1|AAC39530.1|  228|Homo sapiens Pig7 protein.                 33   0.41 
AL365453-1|CAB97009.1|  202|Homo sapiens 8D6 antigen protein.          29   5.1  

>BX537543-1|CAD97778.1|  161|Homo sapiens hypothetical protein
           protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC101969-1|AAI01970.1|  161|Homo sapiens LPS-induced TNF-alpha
           factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC101402-1|AAI01403.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC101401-1|AAI01402.1|  161|Homo sapiens LPS-induced TNF-alpha
           factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC096066-1|AAH96066.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC096065-1|AAH96065.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC096063-1|AAH96063.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC046154-1|AAH46154.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC039840-1|AAH39840.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC016491-1|AAH16491.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC008309-1|AAH08309.1|  161|Homo sapiens lipopolysaccharide-induced
           TNF factor protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>BC000053-1|AAH00053.1|  161|Homo sapiens LITAF protein protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>AB034747-1|BAB32547.1|  161|Homo sapiens small integral membrane
           protein of lysosome/late endosome protein.
          Length = 161

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIGCWP-CVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
             T L    LCL+GC   C  IP+C ++ Q+ +HYCPNC A +G Y
Sbjct: 113 ALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPNCRALLGTY 158


>DQ167023-1|AAZ94626.1|  208|Homo sapiens cell death inducing
           protein protein.
          Length = 208

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 38  GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 94
           G H    +  P PY   P PG                     Q       P    CP C 
Sbjct: 87  GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146

Query: 95  TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
            AI T++         +     C +GC   C  IP   N  ++  H CP+C AYI  Y
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204


>CR533446-1|CAG38477.1|  208|Homo sapiens C16orf5 protein.
          Length = 208

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 38  GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 94
           G H    +  P PY   P PG                     Q       P    CP C 
Sbjct: 87  GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146

Query: 95  TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
            AI T++         +     C +GC   C  IP   N  ++  H CP+C AYI  Y
Sbjct: 147 QAIATKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204


>BC007604-1|AAH07604.1|  125|Homo sapiens Unknown (protein for
           IMAGE:3350242) protein.
          Length = 125

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 38  GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 94
           G H    +  P PY   P PG                     Q       P    CP C 
Sbjct: 4   GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 63

Query: 95  TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
            AI T++         +     C +GC   C  IP   N  ++  H CP+C AYI  Y
Sbjct: 64  QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 121


>BC002882-1|AAH02882.1|  208|Homo sapiens chromosome 16 open reading
           frame 5 protein.
          Length = 208

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 38  GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 94
           G H    +  P PY   P PG                     Q       P    CP C 
Sbjct: 87  GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146

Query: 95  TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
            AI T++         +     C +GC   C  IP   N  ++  H CP+C AYI  Y
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204


>AF195661-1|AAG35583.1|  208|Homo sapiens transmembrane protein I1
           protein.
          Length = 208

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 38  GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 94
           G H    +  P PY   P PG                     Q       P    CP C 
Sbjct: 87  GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146

Query: 95  TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSAYIGNY 151
            AI T++         +     C +GC   C  IP   N  ++  H CP+C AYI  Y
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTY 204


>AF131218-1|AAF26619.1|  261|Homo sapiens chromosome 16 open reading
           frame 5 protein.
          Length = 261

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 28/113 (24%), Positives = 36/113 (31%), Gaps = 4/113 (3%)

Query: 38  GTHFVPPHQNPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQ---MGPDPSHYTCPSCN 94
           G H    +  P PY   P PG                     Q       P    CP C 
Sbjct: 87  GPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQ 146

Query: 95  TAIVTRVERVSTTKTHLFAALLCLIGC-WPCVCIPYCTNSCQNAEHYCPNCSA 146
            AI T++         +     C +GC   C  IP   N  ++  H CP+C A
Sbjct: 147 QAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKA 199


>U77396-1|AAB36550.1|  228|Homo sapiens LPS-Induced TNF-Alpha Factor
           protein.
          Length = 228

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIG 120
             T L    LCL+G
Sbjct: 113 ALTWLSCGSLCLLG 126


>AF010312-1|AAC39530.1|  228|Homo sapiens Pig7 protein.
          Length = 228

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 47  NPPPYVTQPQPGIXXXXXXXXXXXXXXXXXXXRQMGPDPSHYTCPSCNTAIVTRVERVST 106
           NPP Y TQP P                      +    P    CPSCN  IV+++   + 
Sbjct: 57  NPPSYYTQPAPIPNNNPITVQTVYVQHPITFLDR----PIQMCCPSCNKMIVSQLSYNAG 112

Query: 107 TKTHLFAALLCLIG 120
             T L    LCL+G
Sbjct: 113 ALTWLSCGSLCLLG 126


>AL365453-1|CAB97009.1|  202|Homo sapiens 8D6 antigen protein.
          Length = 202

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 38 GTHFVPPHQNPPPYVTQPQPG 58
          G    P H++PPP+V  P PG
Sbjct: 68 GAQCKPGHRHPPPFVLAPSPG 88


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.137    0.466 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,587,851
Number of Sequences: 224733
Number of extensions: 1014885
Number of successful extensions: 6388
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6328
Number of HSP's gapped (non-prelim): 37
length of query: 153
length of database: 73,234,838
effective HSP length: 84
effective length of query: 69
effective length of database: 54,357,266
effective search space: 3750651354
effective search space used: 3750651354
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 61 (28.7 bits)

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