GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000883-TA|BGIBMGA000883-PA|IPR006629|LPS-induced tumor
necrosis factor alpha factor
         (153 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   1.4  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   1.4  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   3.3  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   4.3  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   4.3  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.7  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   7.5  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 80  QMGPDPSHYTCPSCNTAIVTRVERVSTTKTHLFAALLCLIGCWPCVCIPYC 130
           ++G D SH   P+ +T   +      ++ +     L CL  C P  C+P+C
Sbjct: 116 EIGLDRSH---PNRSTTASSEQACSGSSSSSPEPNLDCLSKCSPTKCVPFC 163


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query: 46  QNPPPYVTQPQPG 58
           Q PPPYVT+P  G
Sbjct: 641 QLPPPYVTEPVEG 653


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 48  PPPYVTQPQPG 58
           PPPY+T+P  G
Sbjct: 642 PPPYITEPVEG 652


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 115 LLCLIGCWPCVCI 127
           +LCL+  W C+C+
Sbjct: 251 VLCLLVPWTCICL 263


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 115 LLCLIGCWPCVCI 127
           +LCL+  W C+C+
Sbjct: 251 VLCLLVPWTCICL 263


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 125 VCIPYCTNSCQNAEHYCPNCSAYIGNYS 152
           V +PY +   +N    CP C A  G ++
Sbjct: 221 VLMPYVSTVPKNLREPCPGCVAPYGYHN 248


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 112 FAALLCLIGCWPCVCIPYCTNSCQNAEHYCPNCSAYI 148
           F + L  +G  P    P C +  Q AEH    C  Y+
Sbjct: 904 FRSHLHRMGYVPSPVCPACGDENQTAEHTIFICGMYL 940


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.137    0.466 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,250
Number of Sequences: 2123
Number of extensions: 6330
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 7
length of query: 153
length of database: 516,269
effective HSP length: 59
effective length of query: 94
effective length of database: 391,012
effective search space: 36755128
effective search space used: 36755128
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 44 (21.8 bits)