GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000882-TA|BGIBMGA000882-PA|IPR001684|Ribosomal protein
L27
         (134 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   0.66 
AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine pr...    22   6.1  
AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine pr...    22   6.1  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)

Query: 92  DPNWDHTWVQRMYKG-RYDQTIYK--QYYN 118
           D +W  TWVQ  +KG  Y + ++   ++YN
Sbjct: 26  DDSWQKTWVQSEHKGVEYGKFVHTAGKFYN 55


>AJ271353-1|CAB69785.1|  380|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 380

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 2   FRTKLKHIILVELVRNASKKTGGSTQNTNCKVK 34
           FR++ + +   E    A K  G   +NTN K++
Sbjct: 120 FRSEAESVNFAESAAAAKKINGWVEENTNNKIR 152


>AJ271352-1|CAB69784.1|  379|Anopheles gambiae putative serine
           protease inhibitor protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 2   FRTKLKHIILVELVRNASKKTGGSTQNTNCKVK 34
           FR++ + +   E    A K  G   +NTN K++
Sbjct: 120 FRSEAESVNFAESAAAAKKINGWVEENTNNKIR 152


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,370
Number of Sequences: 2123
Number of extensions: 5415
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 3
length of query: 134
length of database: 516,269
effective HSP length: 58
effective length of query: 76
effective length of database: 393,135
effective search space: 29878260
effective search space used: 29878260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)