Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000881-TA|BGIBMGA000881-PA|IPR003599|Immunoglobulin
subtype, IPR001254|Peptidase S1 and S6, chymotrypsin/Hap
(308 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88184-8|AAK31515.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.8
U88184-6|AAK95875.1| 130|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 29 5.5
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 5.5
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 5.5
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 5.5
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 29 5.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 5.5
AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical ... 29 5.5
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 5.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 5.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 5.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 5.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 5.5
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 28 7.3
Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical p... 28 9.7
Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical p... 28 9.7
AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B prot... 28 9.7
>U88184-8|AAK31515.1| 301|Caenorhabditis elegans Hypothetical
protein F36H5.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 55 VPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNITVTPEDDGEW 96
+PM Y F+ + + +FSG +G +K + E GEW
Sbjct: 243 IPMFYEAFLAYNSEELAFSGVEPESGRLWKGVCRWNEKSGEW 284
>U88184-6|AAK95875.1| 130|Caenorhabditis elegans Hypothetical
protein F36H5.10 protein.
Length = 130
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 55 VPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNITVTPEDDGEW 96
+P+ Y F+ + + ++FSG ++G + + E GEW
Sbjct: 76 IPIVYVAFLAYNSEEFAFSGLEPTSGRFWHGVYKRIEKSGEW 117
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 228
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6226 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6271
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 186 LDRGDCAVTINNVKYDDYGTWTCGA 210
+++ C + INN + DD G +TC A
Sbjct: 650 IEKNVCTLIINNPEVDDTGKYTCEA 674
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 228
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6755 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6800
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 186 LDRGDCAVTINNVKYDDYGTWTCGA 210
+++ C + INN + DD G +TC A
Sbjct: 1179 IEKNVCTLIINNPEVDDTGKYTCEA 1203
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 228
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6436 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6481
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 186 LDRGDCAVTINNVKYDDYGTWTCGA 210
+++ C + INN + DD G +TC A
Sbjct: 860 IEKNVCTLIINNPEVDDTGKYTCEA 884
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 228
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6226 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6271
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 186 LDRGDCAVTINNVKYDDYGTWTCGA 210
+++ C + INN + DD G +TC A
Sbjct: 650 IEKNVCTLIINNPEVDDTGKYTCEA 674
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 228
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6755 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6800
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 186 LDRGDCAVTINNVKYDDYGTWTCGA 210
+++ C + INN + DD G +TC A
Sbjct: 1179 IEKNVCTLIINNPEVDDTGKYTCEA 1203
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 228
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 6436 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 6481
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 186 LDRGDCAVTINNVKYDDYGTWTCGA 210
+++ C + INN + DD G +TC A
Sbjct: 860 IEKNVCTLIINNPEVDDTGKYTCEA 884
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 184 MSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKG 228
+S G C++ I N + DD GT+T A D G + ++ + V+ KG
Sbjct: 5645 VSFRSGVCSLEIFNARVDDAGTYTVTATNDLGVDVSECVLTVQTKG 5690
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 186 LDRGDCAVTINNVKYDDYGTWTCGA 210
+++ C + INN + DD G +TC A
Sbjct: 69 IEKNVCTLIINNPEVDDTGKYTCEA 93
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 185 SLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVK 225
+LD G +T+ N K DD + C A + G+ +D T+ VK
Sbjct: 3970 NLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVTLTVK 4011
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 191 CAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKGIY 230
C++ IN+ + D G ++C A D G T T+ V+ +G Y
Sbjct: 6563 CSLIINDPMWRDSGIYSCVAVNDAGQATTSCTVTVEAEGDY 6603
>AF025453-6|AAM98051.1| 288|Caenorhabditis elegans Hypothetical
protein C08F1.10 protein.
Length = 288
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 55 VPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNITVTPEDDGEW 96
+PM Y F+ + + ++FSG ++G + + E GEW
Sbjct: 230 IPMIYVAFLAYNSEEFAFSGKEPTSGRFWYGVCRWNEKLGEW 271
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 185 SLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVK 225
+LD G +T+ N K DD + C A + G+ +D T+ VK
Sbjct: 3330 NLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVTLTVK 3371
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 191 CAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKGIY 230
C++ IN+ + D G ++C A D G T T+ V+ +G Y
Sbjct: 5923 CSLIINDPMWRDSGIYSCVAVNDAGQATTSCTVTVEAEGDY 5963
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 185 SLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVK 225
+LD G +T+ N K DD + C A + G+ +D T+ VK
Sbjct: 3970 NLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVTLTVK 4011
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 191 CAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKGIY 230
C++ IN+ + D G ++C A D G T T+ V+ +G Y
Sbjct: 6563 CSLIINDPMWRDSGIYSCVAVNDAGQATTSCTVTVEAEGDY 6603
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 185 SLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVK 225
+LD G +T+ N K DD + C A + G+ +D T+ VK
Sbjct: 3970 NLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVTLTVK 4011
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 191 CAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKGIY 230
C++ IN+ + D G ++C A D G T T+ V+ +G Y
Sbjct: 6563 CSLIINDPMWRDSGIYSCVAVNDAGQATTSCTVTVEAEGDY 6603
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 185 SLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVK 225
+LD G +T+ N K DD + C A + G+ +D T+ VK
Sbjct: 3330 NLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVTLTVK 3371
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 191 CAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKGIY 230
C++ IN+ + D G ++C A D G T T+ V+ +G Y
Sbjct: 5923 CSLIINDPMWRDSGIYSCVAVNDAGQATTSCTVTVEAEGDY 5963
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 185 SLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVK 225
+LD G +T+ N K DD + C A + G+ +D T+ VK
Sbjct: 3970 NLDDGTQRLTVTNAKLDDMDEYRCEASNEFGDVWSDVTLTVK 4011
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 191 CAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKGIY 230
C++ IN+ + D G ++C A D G T T+ V+ +G Y
Sbjct: 6563 CSLIINDPMWRDSGIYSCVAVNDAGQATTSCTVTVEAEGDY 6603
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 68 KRYSFSGTTLSAGHCFKNITVTPEDDGEWRCHSGGHETGVEIIKT 112
K+Y F+G + + P +D E HS G++TG +KT
Sbjct: 72 KKYKFNGNFNEGDYYPHKNSEIPMEDTEEIVHSDGYQTGARWMKT 116
>Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical
protein F46B6.3b protein.
Length = 368
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 164 IAEDVTP-DNAILGRFYFPTNMSLDRGDCAVTINNVKYDDY 203
+ E ++P ++G ++ P N S DR CA V + +Y
Sbjct: 25 VLEQISPLPEEVIGTYFHPANFSFDR--CAYATLTVNFSEY 63
>Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical
protein F46B6.3a protein.
Length = 329
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 164 IAEDVTP-DNAILGRFYFPTNMSLDRGDCAVTINNVKYDDY 203
+ E ++P ++G ++ P N S DR CA V + +Y
Sbjct: 25 VLEQISPLPEEVIGTYFHPANFSFDR--CAYATLTVNFSEY 63
>AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B
protein.
Length = 750
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 191 CAVTINNVKYDDYGTWTCGAGLDDGNEHTD-TINVKVKGIY 230
C++ IN+ + D G ++C A D G T T+ V+ +G Y
Sbjct: 642 CSLIINDPMWRDSGIYSCVAVNDAGQATTSCTVTVEAEGDY 682
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,565,078
Number of Sequences: 27539
Number of extensions: 314117
Number of successful extensions: 921
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 841
Number of HSP's gapped (non-prelim): 90
length of query: 308
length of database: 12,573,161
effective HSP length: 81
effective length of query: 227
effective length of database: 10,342,502
effective search space: 2347747954
effective search space used: 2347747954
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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