GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000881-TA|BGIBMGA000881-PA|IPR003599|Immunoglobulin
subtype, IPR001254|Peptidase S1 and S6, chymotrypsin/Hap
         (308 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.93 

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query: 181 PTNMSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTDTINVKVK 227
           P N  +   D  +TINN++  + G + C A    G+  +  I + V+
Sbjct: 748 PNNPDIKVEDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQ 794



 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 153 RFEPPKGRPFNIAEDVTPDNAI 174
           RFEPP+ R     E V P N++
Sbjct: 410 RFEPPQIRHAFNEETVQPGNSV 431


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,582
Number of Sequences: 317
Number of extensions: 3052
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 2
length of query: 308
length of database: 114,650
effective HSP length: 57
effective length of query: 251
effective length of database: 96,581
effective search space: 24241831
effective search space used: 24241831
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)