Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000881-TA|BGIBMGA000881-PA|IPR003599|Immunoglobulin
subtype, IPR001254|Peptidase S1 and S6, chymotrypsin/Hap
(308 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17408| Best HMM Match : I-set (HMM E-Value=7.4e-06) 33 0.29
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 32 0.52
SB_9092| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_5575| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_3191| Best HMM Match : ig (HMM E-Value=3.5e-16) 30 2.1
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 29 3.6
SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 4.8
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_57926| Best HMM Match : I-set (HMM E-Value=3.5e-39) 29 6.3
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_17408| Best HMM Match : I-set (HMM E-Value=7.4e-06)
Length = 136
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 40 FATENENVNIEC-KTDVPMAYCGFVHPSGKRY-SFSGTTLSAGHCFKNITVTPEDDGEWR 97
+ T N + C T P +++P G+ +F G F + D G W
Sbjct: 15 YVTVGYNTSFTCIVTGFPKPTVQWINPGGREVDTFDPRYEIIGDTFYIYNIESNDKGNWT 74
Query: 98 CHSGGHETGVEIIKTIELRVVNEVTALWKN 127
C G + +E + TI + A W+N
Sbjct: 75 CRVTGGDVTIEAVATIIDVYTHPPFASWRN 104
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 32.3 bits (70), Expect = 0.52
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 156 PPKGRPFNIAEDVTPDNAILGRFYFPTNMSLDRGDCAVTINNVKYDDYGTWTCGAGLDDG 215
P KG P + E IL F + S + ++ I+N+ DD GT+ C A +D
Sbjct: 1444 PIKGYPKPVVEWYHGPTRILDGGRFKISESEENDMYSLVISNLIMDDLGTYKCVAS-NDA 1502
Query: 216 NEHTDTINVKVK 227
+ T +N+ VK
Sbjct: 1503 GKATARVNLDVK 1514
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 153 RFEPP-KGRPFNIAEDVTPDNAILGRFYFPTNMSLDRGDCAVTINNVKYDDYGTWTCGAG 211
RF+ P KG P + E IL F + S + ++ I+++ DD GT+ C A
Sbjct: 1151 RFDIPIKGYPKPVVEWFHGPTRILDGGRFKLSESEENDMYSLVISDLVMDDLGTYKCVAN 1210
Query: 212 LDDGNEHTDTINVKVK 227
+D + T N+ VK
Sbjct: 1211 -NDAGKTTARANLDVK 1225
>SB_9092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 40 FATENENVNIEC-KTDVPMAYCGFVHPSGKRY-SFSGTTLSAGHCFKNITVTPEDDGEWR 97
+ T N + C T P +++P G+ +F G F + D G W
Sbjct: 213 YVTVGYNTSFTCIVTGFPKPTVQWINPGGREVDTFDPRYEIIGDTFYIYNIESNDKGNWT 272
Query: 98 CHSGGHETGVEIIKTI 113
C G + +E + TI
Sbjct: 273 CRVTGGDVTIEAVATI 288
>SB_5575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 181 PTNMSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTDTINVKVKGIYTMSF 234
P+ MS D A+TI +V+ D GT+ C A + + + V VK ++ SF
Sbjct: 183 PSRMSYDSR--ALTIKDVRLSDVGTYVCSA-TNVAGQVNGNVTVIVKDLFECSF 233
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 192 AVTINNVKYDDYGTWTCGAGLDDGNEH-TDTINVKV 226
A+ I +V+Y D GT+ C A ++G + T T+ V+V
Sbjct: 12 ALIIKDVRYSDRGTYVCSATNEEGRVNGTVTVIVQV 47
>SB_3191| Best HMM Match : ig (HMM E-Value=3.5e-16)
Length = 326
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 40 FATENENVNIEC-KTDVPMAYCGFVHPSGKRY-SFSGTTLSAGHCFKNITVTPEDDGEWR 97
+ T N + C T P +++P G+ +F G F + D G W
Sbjct: 193 YVTLGYNTSFTCIVTGFPKPTVQWINPGGREVDTFDPRYEIIGDTFYIYNIESNDKGNWT 252
Query: 98 CHSGGHETGVEIIKTI 113
C G + +E + TI
Sbjct: 253 CRVTGGDVTIEAVATI 268
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 88 VTPEDDGEWRCHSGGHETGV--EIIKTIELRVVNEVTALWKNVTVLHAKSVSLVCLTTKR 145
+T E+ G + C+S GV + +T+E+ E+ L K+ TVL ++V C +
Sbjct: 610 ITYEEAGNYTCNSTNIVLGVTRSVSRTVEVLFKPELELLPKSQTVLVNRTVVFTCSASGI 669
Query: 146 LTP 148
TP
Sbjct: 670 PTP 672
>SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1565
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 182 TNMSLDRGDCAVTINNVKYDDYGTWTCGA-GLDDGNEHTDTINVKVKGI 229
TN+ + + +TI NV +D G + C A GL D++N+ VK +
Sbjct: 625 TNLDDEFYNLKLTIINVTVNDSGMYVCDAVGLKPKRFINDSVNINVKAL 673
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 187 DRGDCAVTINNVKYDDYGTWTCGAGLDDGN 216
D G+C++ I ++ +D G + C A DDG+
Sbjct: 4569 DVGECSLVIMDIDREDAGVYKCVAENDDGS 4598
>SB_57926| Best HMM Match : I-set (HMM E-Value=3.5e-39)
Length = 788
Score = 28.7 bits (61), Expect = 6.3
Identities = 36/119 (30%), Positives = 45/119 (37%), Gaps = 12/119 (10%)
Query: 116 RVVNEV-TALWKNVTVLHAKSVSLVCLTTKRLTPLSYCRFEPPKGRPFNIAEDVTPDNAI 174
RV N V T L +N + S L L +T R KG +A V D+ I
Sbjct: 389 RVDNGVYTCLARNSLGVKNASAELKVLAQTNITTPLPPRTIAIKGYSITLAVGVNKDSLI 448
Query: 175 LGRFYF---------PTNMSLDRGDCAVTINNVKYDDYGTWTCGAGLDDGNEHTDTINV 224
RF + P L G A+T V D GT+ C D GN T T+ V
Sbjct: 449 SLRFTWTKDGSSVTDPRMQILANGSLAITA--VHDSDAGTYKCVVSSDVGNASTSTVLV 505
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 28.3 bits (60), Expect = 8.4
Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Query: 41 ATENENVNIECKTDVPMAYCGFVHPSGKRYSFSGTTLSAGHCFKNIT-----VTPEDDGE 95
A ++ENV I C + + + + Y FS + N+T V P D G
Sbjct: 690 ANKDENVTIACSANGTEPFNVIWLKNNEVYDFSSDS-RVHESHNNLTLEIFGVLPNDHGS 748
Query: 96 WRCHSGGHETGVEIIKTIELRVVNEVTALWKNVTVLHAKSVSLVCLTTKRLTP 148
++C T T+ ++ + K T + V C TT +P
Sbjct: 749 YQCDVSNGRTDKSYPGTLIVKYAPQFIVEPKGKTTTEGQVVKFECQTTGNPSP 801
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,318,475
Number of Sequences: 59808
Number of extensions: 412448
Number of successful extensions: 835
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 813
Number of HSP's gapped (non-prelim): 32
length of query: 308
length of database: 16,821,457
effective HSP length: 82
effective length of query: 226
effective length of database: 11,917,201
effective search space: 2693287426
effective search space used: 2693287426
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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