GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000881-TA|BGIBMGA000881-PA|IPR003599|Immunoglobulin
subtype, IPR001254|Peptidase S1 and S6, chymotrypsin/Hap
         (308 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    23   8.2  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   8.2  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 18  FPASIQGYRHFIDLETDGVETIFATENENVNIECKTD 54
           FPA + G R  + L+   +  +   +N+   IE K D
Sbjct: 133 FPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 169


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 74   GTTLSAGHCFKNITVTPEDDGEWRCHSGGHETG 106
            GT  ++  C  N+T+  E  G +   +GG   G
Sbjct: 1125 GTCAASQGCMNNVTIGDEGWGYYETVAGGSGAG 1157


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,319
Number of Sequences: 2123
Number of extensions: 12337
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 2
length of query: 308
length of database: 516,269
effective HSP length: 64
effective length of query: 244
effective length of database: 380,397
effective search space: 92816868
effective search space used: 92816868
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)