Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000880-TA|BGIBMGA000880-PA|IPR001650|Helicase,
C-terminal
(539 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036112-1|AAH36112.1| 786|Homo sapiens suppressor of var1, 3-l... 571 e-162
AL596223-2|CAH71499.1| 786|Homo sapiens suppressor of var1, 3-l... 571 e-162
AF042169-1|AAB97370.1| 786|Homo sapiens putative ATP-dependent ... 564 e-160
AL596223-1|CAH71498.1| 263|Homo sapiens suppressor of var1, 3-l... 225 4e-58
Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein. 39 0.039
X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein. 39 0.039
U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein pro... 39 0.039
CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic... 39 0.039
BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidi... 39 0.039
BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic... 39 0.039
AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidi... 39 0.039
AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidi... 39 0.039
AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidi... 39 0.039
AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller ... 39 0.039
AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase S... 39 0.039
AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein. 39 0.039
AB209605-1|BAD92842.1| 607|Homo sapiens DJ34F7.7 (Superkiller v... 39 0.039
D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein. 37 0.21
BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic... 37 0.21
BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic... 37 0.21
BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein. 37 0.21
BC031779-1|AAH31779.1| 596|Homo sapiens SKIV2L2 protein protein. 37 0.21
BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic... 37 0.21
BC014669-1|AAH14669.2| 706|Homo sapiens SKIV2L2 protein protein. 37 0.21
AK223115-1|BAD96835.1| 479|Homo sapiens DEAD (Asp-Glu-Ala-As) b... 36 0.48
CR457215-1|CAG33496.1| 479|Homo sapiens DDX19 protein. 34 1.1
BC110805-1|AAI10806.1| 449|Homo sapiens DDX19B protein protein. 34 1.1
BC010008-1|AAH10008.1| 370|Homo sapiens DEAD (Asp-Glu-Ala-As) b... 34 1.1
BC006544-1|AAH06544.1| 478|Homo sapiens DEAD (Asp-Glu-Ala-As) b... 34 1.1
BC005162-1|AAH05162.1| 478|Homo sapiens DEAD (Asp-Glu-Ala-As) b... 34 1.1
BC003626-1|AAH03626.1| 479|Homo sapiens DEAD (Asp-Glu-Ala-As) b... 34 1.1
AK223262-1|BAD96982.1| 478|Homo sapiens DDX19-like protein vari... 34 1.1
AK001988-1|BAA92022.1| 478|Homo sapiens protein ( Homo sapiens ... 34 1.1
AJ276704-1|CAC14786.1| 455|Homo sapiens DEAD box protein protein. 34 1.1
AJ237946-1|CAB52189.1| 479|Homo sapiens DEAD Box Protein 5 prot... 34 1.1
AF353720-1|AAK40102.1| 370|Homo sapiens testicular DEAD-box hel... 34 1.1
AB209401-1|BAD92638.1| 313|Homo sapiens DDX19-like protein vari... 34 1.1
CR533509-1|CAG38540.1| 448|Homo sapiens DDX19 protein. 34 1.5
BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 33 2.5
BC029930-1|AAH29930.1| 680|Homo sapiens BTAF1 protein protein. 33 2.5
AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 33 2.5
AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II... 33 2.5
AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor p... 33 2.5
AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 1... 33 2.5
AB208843-1|BAD92080.1| 699|Homo sapiens BTAF1 RNA polymerase II... 33 2.5
AF136175-1|AAP97265.1| 479|Homo sapiens RNA helicase protein. 33 3.4
BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix... 32 4.4
AF183422-1|AAG09691.1| 478|Homo sapiens RNA helicase protein. 32 4.4
AC099396-1|AAY40920.1| 367|Homo sapiens unknown protein. 32 4.4
AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein. 32 4.4
AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta pr... 32 5.9
AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta pr... 32 5.9
AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350... 32 5.9
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350... 32 5.9
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350... 32 5.9
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p... 32 5.9
AB209867-1|BAD93104.1| 2214|Homo sapiens DNA polymerase theta va... 32 5.9
AL138745-1|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix... 31 7.7
AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix... 31 7.7
>BC036112-1|AAH36112.1| 786|Homo sapiens suppressor of var1, 3-like
1 (S. cerevisiae) protein.
Length = 786
Score = 571 bits (1410), Expect = e-162
Identities = 300/558 (53%), Positives = 376/558 (67%), Gaps = 28/558 (5%)
Query: 1 MERFLKSKSGVYCGPLKLLATEIYHKSNKSGTPCDLVTGEERRHASLYNTLINGTDDNDI 60
++++ +KSGVYCGPLKLLA EI+ KSN +G PCDLVTGEER +
Sbjct: 218 IQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTVE 277
Query: 61 ETSDVEPYXXXXXXXX-----PSGHVACTVEMTSLNNKCLQADEIHLCGEAGAINLIEEI 115
S PY P+ A T + L C A+E+HLCGE AI+L+ E+
Sbjct: 278 MCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGL---C--AEEVHLCGEPAAIDLVMEL 332
Query: 116 CNTTGEVMEVRSYKRLTQLKVEDTALGSLDNVQPGDCIVCFNKNDIYSVSRAIEQRGHEV 175
TTGE +EVR YKRLT + V D AL SLDN++PGDCIVCF+KNDIYSVSR IE RG E
Sbjct: 333 MYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLES 392
Query: 176 AVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINEDG 235
AVIYGSLPPGTKLAQA KFNDP CK++VATDAIG+G+NLSIRRIIFYSLIKP INE G
Sbjct: 393 AVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKG 452
Query: 236 EKEMDVISISQALQIAGRAGRYGSAWETGHVTSYRPEDLATLKTLLSQPPEPVTQAGLHP 295
E+E++ I+ SQALQIAGRAGR+ S ++ G VT+ EDL+ LK +L +P +P+ AGLHP
Sbjct: 453 ERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHP 512
Query: 296 TSEQMELYAYHLPHATLSSLMDIFVHLCTVDDSLYFMCNTEGFKFLAEMIQHVPLPLRAR 355
T+EQ+E++AYHLP ATLS+L+DIFV VD YF+CN + FKF AE+IQH+PL LR R
Sbjct: 513 TAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQ-YFVCNMDDFKFSAELIQHIPLSLRVR 571
Query: 356 YVFCCAPINNKLPFVCATFLKMVRQYSRNEPITRNWLSGTVEWPLPSPRTILDLVHLESV 415
YVFC APIN K PFVC++ L+ RQYSRNEP+T WL ++WPL P+ I DL+ LE+V
Sbjct: 572 YVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAV 631
Query: 416 FDVLELYLWLSYRFPDMFPDVKLVRDMETELDAIIQQGIFQITRLLRNSEQMIRDEDSGF 475
DVL+LYLWLSYRF DMFPD L+RD++ ELD IIQ G+ IT+L++ SE GF
Sbjct: 632 HDVLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGF 691
Query: 476 AIGHGSK------------RVNKML---AGQSMGEEKGKLS--ELLVARGLITPQMLKKL 518
G S+ R K L A + + G+LS LV +GL+TP MLK+L
Sbjct: 692 PSGSQSRLSGTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQL 751
Query: 519 QQELSTDKKIDRTKKNRN 536
++E T + +K +
Sbjct: 752 EKEWMTQQTEHNKEKTES 769
>AL596223-2|CAH71499.1| 786|Homo sapiens suppressor of var1, 3-like
1 (S. cerevisiae) protein.
Length = 786
Score = 571 bits (1410), Expect = e-162
Identities = 300/558 (53%), Positives = 376/558 (67%), Gaps = 28/558 (5%)
Query: 1 MERFLKSKSGVYCGPLKLLATEIYHKSNKSGTPCDLVTGEERRHASLYNTLINGTDDNDI 60
++++ +KSGVYCGPLKLLA EI+ KSN +G PCDLVTGEER +
Sbjct: 218 IQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTVE 277
Query: 61 ETSDVEPYXXXXXXXX-----PSGHVACTVEMTSLNNKCLQADEIHLCGEAGAINLIEEI 115
S PY P+ A T + L C A+E+HLCGE AI+L+ E+
Sbjct: 278 MCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGL---C--AEEVHLCGEPAAIDLVMEL 332
Query: 116 CNTTGEVMEVRSYKRLTQLKVEDTALGSLDNVQPGDCIVCFNKNDIYSVSRAIEQRGHEV 175
TTGE +EVR YKRLT + V D AL SLDN++PGDCIVCF+KNDIYSVSR IE RG E
Sbjct: 333 MYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLES 392
Query: 176 AVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINEDG 235
AVIYGSLPPGTKLAQA KFNDP CK++VATDAIG+G+NLSIRRIIFYSLIKP INE G
Sbjct: 393 AVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKG 452
Query: 236 EKEMDVISISQALQIAGRAGRYGSAWETGHVTSYRPEDLATLKTLLSQPPEPVTQAGLHP 295
E+E++ I+ SQALQIAGRAGR+ S ++ G VT+ EDL+ LK +L +P +P+ AGLHP
Sbjct: 453 ERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHP 512
Query: 296 TSEQMELYAYHLPHATLSSLMDIFVHLCTVDDSLYFMCNTEGFKFLAEMIQHVPLPLRAR 355
T+EQ+E++AYHLP ATLS+L+DIFV VD YF+CN + FKF AE+IQH+PL LR R
Sbjct: 513 TAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQ-YFVCNMDDFKFSAELIQHIPLSLRVR 571
Query: 356 YVFCCAPINNKLPFVCATFLKMVRQYSRNEPITRNWLSGTVEWPLPSPRTILDLVHLESV 415
YVFC APIN K PFVC++ L+ RQYSRNEP+T WL ++WPL P+ I DL+ LE+V
Sbjct: 572 YVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAV 631
Query: 416 FDVLELYLWLSYRFPDMFPDVKLVRDMETELDAIIQQGIFQITRLLRNSEQMIRDEDSGF 475
DVL+LYLWLSYRF DMFPD L+RD++ ELD IIQ G+ IT+L++ SE GF
Sbjct: 632 HDVLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGF 691
Query: 476 AIGHGSK------------RVNKML---AGQSMGEEKGKLS--ELLVARGLITPQMLKKL 518
G S+ R K L A + + G+LS LV +GL+TP MLK+L
Sbjct: 692 PSGSQSRLSGTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQL 751
Query: 519 QQELSTDKKIDRTKKNRN 536
++E T + +K +
Sbjct: 752 EKEWMTQQTEHNKEKTES 769
>AF042169-1|AAB97370.1| 786|Homo sapiens putative ATP-dependent
mitochondrial RNA helicase protein.
Length = 786
Score = 564 bits (1392), Expect = e-160
Identities = 297/558 (53%), Positives = 373/558 (66%), Gaps = 28/558 (5%)
Query: 1 MERFLKSKSGVYCGPLKLLATEIYHKSNKSGTPCDLVTGEERRHASLYNTLINGTDDNDI 60
++++ +KSGVYCGPL LA EI+ KSN +G PCDL TGEER +
Sbjct: 218 IQKYFSAKSGVYCGPLTSLAHEIFEKSNAAGVPCDLETGEERVTVQPNGKQASHVSCTVE 277
Query: 61 ETSDVEPYXXXXXXXX-----PSGHVACTVEMTSLNNKCLQADEIHLCGEAGAINLIEEI 115
S PY P+ A T + L C A+E+HLCGE AI+L+ E+
Sbjct: 278 MCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGL---C--AEEVHLCGEPAAIDLVMEL 332
Query: 116 CNTTGEVMEVRSYKRLTQLKVEDTALGSLDNVQPGDCIVCFNKNDIYSVSRAIEQRGHEV 175
TTGE +EVR YKRLT + V D AL SLDN++PGDCIVCF+KNDIYSVSR IE RG E
Sbjct: 333 MYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLES 392
Query: 176 AVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINEDG 235
AVIYGSLPPGTKLAQA KFNDP CK++VATDAIG+G+NLSIRRIIFYSLIKP INE G
Sbjct: 393 AVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKG 452
Query: 236 EKEMDVISISQALQIAGRAGRYGSAWETGHVTSYRPEDLATLKTLLSQPPEPVTQAGLHP 295
E+E++ I+ SQALQIAGRAGR+ S ++ G VT+ EDL+ LK +L +P +P+ AGLHP
Sbjct: 453 ERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHP 512
Query: 296 TSEQMELYAYHLPHATLSSLMDIFVHLCTVDDSLYFMCNTEGFKFLAEMIQHVPLPLRAR 355
T+EQ+E++AYHLP ATLS+L+DIFV VD YF+CN + FKF AE+IQH+PL LR R
Sbjct: 513 TAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQ-YFVCNMDDFKFSAELIQHIPLSLRVR 571
Query: 356 YVFCCAPINNKLPFVCATFLKMVRQYSRNEPITRNWLSGTVEWPLPSPRTILDLVHLESV 415
YVFC APIN K PFVC++ L+ RQYSRNEP+T WL ++WPL P+ I DL+ LE+V
Sbjct: 572 YVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAV 631
Query: 416 FDVLELYLWLSYRFPDMFPDVKLVRDMETELDAIIQQGIFQITRLLRNSEQMIRDEDSGF 475
DVL+LYLWLSYRF DMFPD L+RD++ ELD IIQ G+ IT+L++ SE GF
Sbjct: 632 HDVLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSETHKLLNLEGF 691
Query: 476 AIGHGSK------------RVNKML---AGQSMGEEKGKLS--ELLVARGLITPQMLKKL 518
G S+ R K L A + + G+LS LV +GL+TP MLK+L
Sbjct: 692 PSGSQSRLSGTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQGLLTPDMLKQL 751
Query: 519 QQELSTDKKIDRTKKNRN 536
++E T + +K +
Sbjct: 752 EKEWMTQQTEHNKEKTES 769
>AL596223-1|CAH71498.1| 263|Homo sapiens suppressor of var1, 3-like
1 (S. cerevisiae) protein.
Length = 263
Score = 225 bits (549), Expect = 4e-58
Identities = 106/146 (72%), Positives = 123/146 (84%)
Query: 95 LQADEIHLCGEAGAINLIEEICNTTGEVMEVRSYKRLTQLKVEDTALGSLDNVQPGDCIV 154
L A+E+HLCGE AI+L+ E+ TTGE +EVR YKRLT + V D AL SLDN++PGDCIV
Sbjct: 118 LCAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIV 177
Query: 155 CFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGI 214
CF+KNDIYSVSR IE RG E AVIYGSLPPGTKLAQA KFNDP CK++VATDAIG+G+
Sbjct: 178 CFSKNDIYSVSRQIEIRGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGL 237
Query: 215 NLSIRRIIFYSLIKPVINEDGEKEMD 240
NLSIRRIIFYSLIKP INE GE+E++
Sbjct: 238 NLSIRRIIFYSLIKPSINEKGERELE 263
>Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein
protein.
Length = 1245
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 656 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 707
>CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller
viralicidic activity 2 (S. cerevisiae homolog)-like
(SKI2 protein.
Length = 1245
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 656 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 707
>AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase
Ski2w protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 657 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 708
>AB209605-1|BAD92842.1| 607|Homo sapiens DJ34F7.7 (Superkiller
viralicidic activity 2 -like variant protein.
Length = 607
Score = 39.1 bits (87), Expect = 0.039
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
KV+ AT+ +G+N+ R ++F S+ K DG D++ + +Q+AGRAGR G
Sbjct: 233 KVLFATETFAMGVNMPARTVVFDSMRK----HDGSTFRDLLP-GEYVQMAGRAGRRG 284
>D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein.
Length = 1046
Score = 36.7 bits (81), Expect = 0.21
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 175 VAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINED 234
+ + +G L P K F+ E K + AT+ +GIN+ R ++F + K D
Sbjct: 456 IGIHHGGLLPILKETIEILFS--EGLIKALFATETFAMGINMPARTVLFTNARK----FD 509
Query: 235 GEKEMDVISISQALQIAGRAGRYG 258
G K+ IS + +Q++GRAGR G
Sbjct: 510 G-KDFRWISSGEYIQMSGRAGRRG 532
>BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.21
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 175 VAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINED 234
+ + +G L P K F+ E K + AT+ +GIN+ R ++F + K D
Sbjct: 452 IGIHHGGLLPILKETIEILFS--EGLIKALFATETFAMGINMPARTVLFTNARK----FD 505
Query: 235 GEKEMDVISISQALQIAGRAGRYG 258
G K+ IS + +Q++GRAGR G
Sbjct: 506 G-KDFRWISSGEYIQMSGRAGRRG 528
>BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.21
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 175 VAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINED 234
+ + +G L P K F+ E K + AT+ +GIN+ R ++F + K D
Sbjct: 452 IGIHHGGLLPILKETIEILFS--EGLIKALFATETFAMGINMPARTVLFTNARK----FD 505
Query: 235 GEKEMDVISISQALQIAGRAGRYG 258
G K+ IS + +Q++GRAGR G
Sbjct: 506 G-KDFRWISSGEYIQMSGRAGRRG 528
>BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein.
Length = 1043
Score = 36.7 bits (81), Expect = 0.21
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 175 VAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINED 234
+ + +G L P K F+ E K + AT+ +GIN+ R ++F + K D
Sbjct: 453 IGIHHGGLLPILKETIEILFS--EGLIKALFATETFAMGINMPARTVLFTNARK----FD 506
Query: 235 GEKEMDVISISQALQIAGRAGRYG 258
G K+ IS + +Q++GRAGR G
Sbjct: 507 G-KDFRWISSGEYIQMSGRAGRRG 529
>BC031779-1|AAH31779.1| 596|Homo sapiens SKIV2L2 protein protein.
Length = 596
Score = 36.7 bits (81), Expect = 0.21
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 175 VAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINED 234
+ + +G L P K F+ E K + AT+ +GIN+ R ++F + K D
Sbjct: 6 IGIHHGGLLPILKETIEILFS--EGLIKALFATETFAMGINMPARTVLFTNARK----FD 59
Query: 235 GEKEMDVISISQALQIAGRAGRYG 258
G K+ IS + +Q++GRAGR G
Sbjct: 60 G-KDFRWISSGEYIQMSGRAGRRG 82
>BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 36.7 bits (81), Expect = 0.21
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 175 VAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINED 234
+ + +G L P K F+ E K + AT+ +GIN+ R ++F + K D
Sbjct: 452 IGIHHGGLLPILKETIEILFS--EGLIKALFATETFAMGINMPARTVLFTNARK----FD 505
Query: 235 GEKEMDVISISQALQIAGRAGRYG 258
G K+ IS + +Q++GRAGR G
Sbjct: 506 G-KDFRWISSGEYIQMSGRAGRRG 528
>BC014669-1|AAH14669.2| 706|Homo sapiens SKIV2L2 protein protein.
Length = 706
Score = 36.7 bits (81), Expect = 0.21
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 175 VAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLSIRRIIFYSLIKPVINED 234
+ + +G L P K F+ E K + AT+ +GIN+ R ++F + K D
Sbjct: 116 IGIHHGGLLPILKETIEILFS--EGLIKALFATETFAMGINMPARTVLFTNARK----FD 169
Query: 235 GEKEMDVISISQALQIAGRAGRYG 258
G K+ IS + +Q++GRAGR G
Sbjct: 170 G-KDFRWISSGEYIQMSGRAGRRG 192
>AK223115-1|BAD96835.1| 479|Homo sapiens DEAD (Asp-Glu-Ala-As) box
polypeptide 19 variant protein.
Length = 479
Score = 35.5 bits (78), Expect = 0.48
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 338 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 395
Query: 213 GINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI+ + ++ + +N+DG + + L GR GR+G
Sbjct: 396 GID--VEQVSVVTNFDLPVNKDGNPDNETY-----LHRIGRTGRFG 434
>CR457215-1|CAG33496.1| 479|Homo sapiens DDX19 protein.
Length = 479
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 338 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 395
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 396 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 434
>BC110805-1|AAI10806.1| 449|Homo sapiens DDX19B protein protein.
Length = 449
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 308 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 365
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 366 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 404
>BC010008-1|AAH10008.1| 370|Homo sapiens DEAD (Asp-Glu-Ala-As) box
polypeptide 19B protein.
Length = 370
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 229 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 286
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 287 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 325
>BC006544-1|AAH06544.1| 478|Homo sapiens DEAD (Asp-Glu-Ala-As) box
polypeptide 19A protein.
Length = 478
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 337 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 394
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 395 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 433
>BC005162-1|AAH05162.1| 478|Homo sapiens DEAD (Asp-Glu-Ala-As) box
polypeptide 19A protein.
Length = 478
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 337 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 394
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 395 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 433
>BC003626-1|AAH03626.1| 479|Homo sapiens DEAD (Asp-Glu-Ala-As) box
polypeptide 19B protein.
Length = 479
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 338 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 395
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 396 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 434
>AK223262-1|BAD96982.1| 478|Homo sapiens DDX19-like protein variant
protein.
Length = 478
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 337 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 394
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 395 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 433
>AK001988-1|BAA92022.1| 478|Homo sapiens protein ( Homo sapiens
cDNA FLJ11126 fis, clone PLACE1006196, weakly similar to
PUTATIVE ATP-DEPENDENT RNA HELICASE C12C2.06. ).
Length = 478
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 337 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 394
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 395 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 433
>AJ276704-1|CAC14786.1| 455|Homo sapiens DEAD box protein protein.
Length = 455
Score = 34.3 bits (75), Expect = 1.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 122 VMEVRSYKRLTQLKVEDTALGSLDNVQPGDC--IVCFNKNDIYSVSRAIEQRGHEVAVIY 179
V +++ Y K +DT L + N G+ I C N+ + + G ++
Sbjct: 235 VEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLH 294
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINL 216
G + +L NKF ESS +++ATD G+++
Sbjct: 295 GQMSQSKRLGSLNKFKAKESS--ILLATDVASRGLDI 329
>AJ237946-1|CAB52189.1| 479|Homo sapiens DEAD Box Protein 5
protein.
Length = 479
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 338 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 395
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 396 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 434
>AF353720-1|AAK40102.1| 370|Homo sapiens testicular DEAD-box
helicase protein protein.
Length = 370
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 229 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 286
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 287 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 325
>AB209401-1|BAD92638.1| 313|Homo sapiens DDX19-like protein variant
protein.
Length = 313
Score = 34.3 bits (75), Expect = 1.1
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 172 IFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 229
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 230 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 268
>CR533509-1|CAG38540.1| 448|Homo sapiens DDX19 protein.
Length = 448
Score = 33.9 bits (74), Expect = 1.5
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+VA++ G + + A +F E KV+V T+
Sbjct: 307 IFCHTRKTASWLAAELSKEGHQVALLSGEVMVEQRAAVIERFR--EGKEKVLVTTNVCAR 364
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 365 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 403
>BC112201-1|AAI12202.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa protein.
Length = 1849
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLS 217
GS+PPG + + ++FN+ S +++ T GLG+NL+
Sbjct: 1679 GSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT 1716
>BC029930-1|AAH29930.1| 680|Homo sapiens BTAF1 protein protein.
Length = 680
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLS 217
GS+PPG + + ++FN+ S +++ T GLG+NL+
Sbjct: 510 GSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT 547
>AL365398-1|CAI14103.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLS 217
GS+PPG + + ++FN+ S +++ T GLG+NL+
Sbjct: 1679 GSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT 1716
>AL359198-2|CAH73478.1| 1849|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa (Mot1
protein.
Length = 1849
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLS 217
GS+PPG + + ++FN+ S +++ T GLG+NL+
Sbjct: 1679 GSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT 1716
>AJ001017-1|CAA04475.1| 1849|Homo sapiens TBP associated factor
protein.
Length = 1849
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLS 217
GS+PPG + + ++FN+ S +++ T GLG+NL+
Sbjct: 1679 GSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT 1716
>AF038362-1|AAC04573.1| 1849|Homo sapiens TBP-associated factor 172
protein.
Length = 1849
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLS 217
GS+PPG + + ++FN+ S +++ T GLG+NL+
Sbjct: 1679 GSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT 1716
>AB208843-1|BAD92080.1| 699|Homo sapiens BTAF1 RNA polymerase II,
B-TFIID transcription factor-associated, 170kDa varian
protein.
Length = 699
Score = 33.1 bits (72), Expect = 2.5
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 180 GSLPPGTKLAQANKFNDPESSCKVMVATDAIGLGINLS 217
GS+PPG + + ++FN+ S +++ T GLG+NL+
Sbjct: 529 GSIPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLT 566
>AF136175-1|AAP97265.1| 479|Homo sapiens RNA helicase protein.
Length = 479
Score = 32.7 bits (71), Expect = 3.4
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+V ++ G + + A +F E KV+V T+
Sbjct: 338 IFCHTRKTASWLAAELSKEGHQVVLLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 395
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 396 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 434
>BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1052
Score = 32.3 bits (70), Expect = 4.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 171 RGHEVAVIYGSLPPGTKLAQANKFNDPESSCKV-MVATDAIGLGINLSIRRII 222
R +E + G P + N +N+P S+ V M++T A GLGINL+ ++
Sbjct: 522 RNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVV 574
>AF183422-1|AAG09691.1| 478|Homo sapiens RNA helicase protein.
Length = 478
Score = 32.3 bits (70), Expect = 4.4
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 153 IVCFNKNDIYSVSRAIEQRGHEVAVIYGSLPPGTKLAQANKFNDPESSCKVMVATDAIGL 212
I C + ++ + + GH+V ++ G + + A +F E KV+V T+
Sbjct: 337 IFCHTRKTASWLAAELSKEGHQVLMLSGEMMVEQRAAVIERFR--EGKEKVLVTTNVCAR 394
Query: 213 GINL-SIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
GI++ + +I + L PV ++DG + + L GR GR+G
Sbjct: 395 GIDVEQVSVVINFDL--PV-DKDGNPDNETY-----LHRIGRTGRFG 433
>AC099396-1|AAY40920.1| 367|Homo sapiens unknown protein.
Length = 367
Score = 32.3 bits (70), Expect = 4.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 171 RGHEVAVIYGSLPPGTKLAQANKFNDPESSCKV-MVATDAIGLGINLSIRRII 222
R +E + G P + N +N+P S+ V M++T A GLGINL+ ++
Sbjct: 255 RNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVV 307
>AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein.
Length = 1052
Score = 32.3 bits (70), Expect = 4.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 171 RGHEVAVIYGSLPPGTKLAQANKFNDPESSCKV-MVATDAIGLGINLSIRRII 222
R +E + G P + N +N+P S+ V M++T A GLGINL+ ++
Sbjct: 522 RNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVV 574
>AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta
protein.
Length = 2590
Score = 31.9 bits (69), Expect = 5.9
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
+V+ AT + G+NL RR+I + P+ G + +D+++ Q+ GRAGR G
Sbjct: 438 RVLAATSTLSSGVNLPARRVIIRT---PIF---GGRPLDILTYK---QMVGRAGRKG 485
>AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta
protein.
Length = 2724
Score = 31.9 bits (69), Expect = 5.9
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
+V+ AT + G+NL RR+I + P+ G + +D+++ Q+ GRAGR G
Sbjct: 573 RVLAATSTLSSGVNLPARRVIIRT---PIF---GGRPLDILTYK---QMVGRAGRKG 620
>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 31.9 bits (69), Expect = 5.9
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 245 SQALQIAGRAGRYGSAWETGHVTSYRPEDLATLKTLLSQPPEPVTQAGLHPTSEQMELYA 304
S+A ++AG + YGSAW T + P Q P T+A P + E
Sbjct: 841 SEAKKLAGASINYGSAWNTEYDVQQAP-----------QEDGPWTKAVTPPVKDDNE--- 886
Query: 305 YHLPHATLSSLMDIFVHLCTVDDSLYFMCNTEGFKFLAEMIQ 346
+ A + ++ V T DD L + N FK L EMI+
Sbjct: 887 -DVFSARIQKMLGSCVSHATFDDDLPGVGNLSEFKKLPEMIR 927
>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 31.9 bits (69), Expect = 5.9
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 245 SQALQIAGRAGRYGSAWETGHVTSYRPEDLATLKTLLSQPPEPVTQAGLHPTSEQMELYA 304
S+A ++AG + YGSAW T + P Q P T+A P + E
Sbjct: 841 SEAKKLAGASINYGSAWNTEYDVQQAP-----------QEDGPWTKAVTPPVKDDNE--- 886
Query: 305 YHLPHATLSSLMDIFVHLCTVDDSLYFMCNTEGFKFLAEMIQ 346
+ A + ++ V T DD L + N FK L EMI+
Sbjct: 887 -DVFSARIQKMLGSCVSHATFDDDLPGVGNLSEFKKLPEMIR 927
>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 31.9 bits (69), Expect = 5.9
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 245 SQALQIAGRAGRYGSAWETGHVTSYRPEDLATLKTLLSQPPEPVTQAGLHPTSEQMELYA 304
S+A ++AG + YGSAW T + P Q P T+A P + E
Sbjct: 841 SEAKKLAGASINYGSAWNTEYDVQQAP-----------QEDGPWTKAVTPPVKDDNE--- 886
Query: 305 YHLPHATLSSLMDIFVHLCTVDDSLYFMCNTEGFKFLAEMIQ 346
+ A + ++ V T DD L + N FK L EMI+
Sbjct: 887 -DVFSARIQKMLGSCVSHATFDDDLPGVGNLSEFKKLPEMIR 927
>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
protein 350 protein.
Length = 3117
Score = 31.9 bits (69), Expect = 5.9
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 245 SQALQIAGRAGRYGSAWETGHVTSYRPEDLATLKTLLSQPPEPVTQAGLHPTSEQMELYA 304
S+A ++AG + YGSAW T + P Q P T+A P + E
Sbjct: 841 SEAKKLAGASINYGSAWNTEYDVQQAP-----------QEDGPWTKAVTPPVKDDNE--- 886
Query: 305 YHLPHATLSSLMDIFVHLCTVDDSLYFMCNTEGFKFLAEMIQ 346
+ A + ++ V T DD L + N FK L EMI+
Sbjct: 887 -DVFSARIQKMLGSCVSHATFDDDLPGVGNLSEFKKLPEMIR 927
>AB209867-1|BAD93104.1| 2214|Homo sapiens DNA polymerase theta
variant protein.
Length = 2214
Score = 31.9 bits (69), Expect = 5.9
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 202 KVMVATDAIGLGINLSIRRIIFYSLIKPVINEDGEKEMDVISISQALQIAGRAGRYG 258
+V+ AT + G+NL RR+I + P+ G + +D+++ Q+ GRAGR G
Sbjct: 62 RVLAATSTLSSGVNLPARRVIIRT---PIF---GGRPLDILTYK---QMVGRAGRKG 109
>AL138745-1|CAI42612.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 7.7
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 171 RGHEVAVIYGSLPPGTKLAQANKFNDPESSCKV-MVATDAIGLGINLSIRRII 222
RG+E + G P + FN P SS + M++T A GLGINL+ ++
Sbjct: 525 RGYEYCRLDGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVV 577
>AL022577-2|CAI42682.1| 1042|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1042
Score = 31.5 bits (68), Expect = 7.7
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 171 RGHEVAVIYGSLPPGTKLAQANKFNDPESSCKV-MVATDAIGLGINLSIRRII 222
RG+E + G P + FN P SS + M++T A GLGINL+ ++
Sbjct: 525 RGYEYCRLDGQTPHEEREEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVV 577
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.135 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,830,851
Number of Sequences: 224733
Number of extensions: 3224317
Number of successful extensions: 6815
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 6749
Number of HSP's gapped (non-prelim): 79
length of query: 539
length of database: 73,234,838
effective HSP length: 94
effective length of query: 445
effective length of database: 52,109,936
effective search space: 23188921520
effective search space used: 23188921520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 68 (31.5 bits)
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