GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000879-TA|BGIBMGA000879-PA|IPR008015|GMP
phosphodiesterase, delta subunit
         (131 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    27   0.21 
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    27   0.27 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   5.9  

>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
          protein OBPjj5c protein.
          Length = 155

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 58 EQKVLFKGRC-LEEWFFDFGYVIPNSTNTWQSVIESA 93
          E  +LF G+  +E+        +PN T TWQ VIE A
Sbjct: 41 ETGILFNGQFRVEQAVKALSTQVPNDTLTWQHVIEVA 77


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 25  EHEARVPKRILKCRVVSREMNFSSIESMDRFRL----EQKVLFKGRCLEEWFFDFGYVIP 80
           +H   + +  ++C   + E  F         RL    + + +  GR L E F++ G  I 
Sbjct: 206 QHGPHLDRLYVQCNNYANETRFRETTGTCYRRLKSECQDECVLAGRFLRECFYEGGISIV 265

Query: 81  NSTNTWQSVIESA 93
           NS    ++ +ESA
Sbjct: 266 NSLPASEASVESA 278


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 105  NGNVVIETKFFDG 117
            N NV+  TKF DG
Sbjct: 1150 NANVLFRTKFIDG 1162


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.135    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,596
Number of Sequences: 2123
Number of extensions: 5325
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 131
length of database: 516,269
effective HSP length: 58
effective length of query: 73
effective length of database: 393,135
effective search space: 28698855
effective search space used: 28698855
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)