GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000878-TA|BGIBMGA000878-PA|undefined
         (716 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    25   1.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   3.8  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 675 TDMVRCLGITKMLPNAEDSLELVNDKKDFWKCI 707
           T ++R LG+       +   E V D  D+W C+
Sbjct: 502 TTVMRDLGVEFQKIELKQCDEFVEDSDDYWNCV 534


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 103 PPPVSVKTTGPVWDIGQVL 121
           PP V ++ TG  W++G +L
Sbjct: 92  PPAVLLQLTGGTWELGPML 110


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,526
Number of Sequences: 429
Number of extensions: 6196
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 716
length of database: 140,377
effective HSP length: 63
effective length of query: 653
effective length of database: 113,350
effective search space: 74017550
effective search space used: 74017550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)