GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000877-TA|BGIBMGA000877-PA|undefined
         (313 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.8  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   8.4  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 14/47 (29%), Positives = 22/47 (46%)

Query: 201 KKRKAPQPQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATE 247
           KK+      + S PS    +A    N + +S S +T P P   T+T+
Sbjct: 914 KKQNLKFIDEASTPSTSAMAATIVPNPVQASPSPATAPAPAKTTSTD 960


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 73  DVSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAV----PNQ 128
           D +   +TP+PT T + + +  P       +   PT +       T++T   +    P  
Sbjct: 191 DPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTT 250

Query: 129 NTTDVSTDP 137
            TT V TDP
Sbjct: 251 TTTTVWTDP 259


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.127    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,069
Number of Sequences: 2123
Number of extensions: 11031
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 3
length of query: 313
length of database: 516,269
effective HSP length: 64
effective length of query: 249
effective length of database: 380,397
effective search space: 94718853
effective search space used: 94718853
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)