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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000877-TA|BGIBMGA000877-PA|undefined
         (313 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein.               38   0.034
AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamyci...    38   0.034
AB037724-1|BAA92541.1| 1119|Homo sapiens KIAA1303 protein protein.     38   0.034
Y08806-1|CAA70044.1|  353|Homo sapiens EWS protein.                    33   1.3  
Y07848-1|CAA69177.1|  656|Homo sapiens RNA binding protein protein.    33   1.3  
X72990-1|CAA51489.1|  656|Homo sapiens EWS protein.                    33   1.3  
X66899-1|CAA47350.1|  656|Homo sapiens RNA binding protein protein.    33   1.3  
U35622-1|AAB03569.2|  478|Homo sapiens EWS protein/E1A enhancer ...    33   1.3  
CR456490-1|CAG30376.1|  655|Homo sapiens EWSR1 protein.                33   1.3  
BC072442-1|AAH72442.1|  655|Homo sapiens Ewing sarcoma breakpoin...    33   1.3  
BC011048-1|AAH11048.1|  655|Homo sapiens Ewing sarcoma breakpoin...    33   1.3  
BC004817-1|AAH04817.1|  656|Homo sapiens Ewing sarcoma breakpoin...    33   1.3  
BC000527-1|AAH00527.1|  354|Homo sapiens EWSR1 protein protein.        33   1.3  
AL031186-2|CAI18001.1|  656|Homo sapiens Ewing sarcoma breakpoin...    33   1.3  
AK056309-1|BAB71145.1|  661|Homo sapiens protein ( Homo sapiens ...    33   1.3  
AF327066-1|AAK11227.1|  476|Homo sapiens Ewings sarcoma EWS-Fli1...    33   1.3  
AF254088-1|AAG09037.1|  609|Homo sapiens EWS/ZSG fusion protein ...    33   1.3  
AF254087-1|AAG09036.1|  713|Homo sapiens EWS/ZSG fusion protein ...    33   1.3  
AF254086-1|AAG09035.1|  609|Homo sapiens EWS/ZSG fusion protein ...    33   1.3  
U05781-1|AAA74391.1|  540|Homo sapiens zona pellucida B protein ...    32   2.3  
BC069521-1|AAH69521.1|  540|Homo sapiens zona pellucida glycopro...    32   2.3  
AL359924-2|CAI22066.1|  540|Homo sapiens zona pellucida glycopro...    32   2.3  
AB002361-1|BAA20818.1| 1522|Homo sapiens KIAA0363 protein.             31   6.9  
AK074928-1|BAC11298.1|  356|Homo sapiens protein ( Homo sapiens ...    30   9.1  
AF346602-1|AAK29083.1|  476|Homo sapiens Sec61 alpha form 1 prot...    30   9.1  
AF084458-1|AAD39847.1|  476|Homo sapiens sec61 homolog protein.        30   9.1  

>AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein.
          Length = 1335

 Score = 38.3 bits (85), Expect = 0.034
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 232 ISRSTGPPPYSETATELVTLDASD--ATRDVSFGKPIDTGTWDI-VAEHREQLNRTTHAV 288
           I ++ G PP S T++  +T D +    +RD+  G+P  TG        H  Q  RT    
Sbjct: 871 IHQAGGSPPASSTSSSSLTNDVAKQPVSRDLPSGRPGTTGPAGAQYTPHSHQFPRTRKMF 930

Query: 289 DKNDKQTVIDLNYSAG 304
           DK  +QT  D + +AG
Sbjct: 931 DKGPEQTADDADDAAG 946


>AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamycin
           (TOR)-scaffold protein containing WD-repeats protein.
          Length = 1335

 Score = 38.3 bits (85), Expect = 0.034
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 232 ISRSTGPPPYSETATELVTLDASD--ATRDVSFGKPIDTGTWDI-VAEHREQLNRTTHAV 288
           I ++ G PP S T++  +T D +    +RD+  G+P  TG        H  Q  RT    
Sbjct: 871 IHQAGGSPPASSTSSSSLTNDVAKQPVSRDLPSGRPGTTGPAGAQYTPHSHQFPRTRKMF 930

Query: 289 DKNDKQTVIDLNYSAG 304
           DK  +QT  D + +AG
Sbjct: 931 DKGPEQTADDADDAAG 946


>AB037724-1|BAA92541.1| 1119|Homo sapiens KIAA1303 protein protein.
          Length = 1119

 Score = 38.3 bits (85), Expect = 0.034
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 232 ISRSTGPPPYSETATELVTLDASD--ATRDVSFGKPIDTGTWDI-VAEHREQLNRTTHAV 288
           I ++ G PP S T++  +T D +    +RD+  G+P  TG        H  Q  RT    
Sbjct: 655 IHQAGGSPPASSTSSSSLTNDVAKQPVSRDLPSGRPGTTGPAGAQYTPHSHQFPRTRKMF 714

Query: 289 DKNDKQTVIDLNYSAG 304
           DK  +QT  D + +AG
Sbjct: 715 DKGPEQTADDADDAAG 730


>Y08806-1|CAA70044.1|  353|Homo sapiens EWS protein.
          Length = 353

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 151 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 210

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 211 YDQSSYSQQNTYGQPSSYG 229


>Y07848-1|CAA69177.1|  656|Homo sapiens RNA binding protein protein.
          Length = 656

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>X72990-1|CAA51489.1|  656|Homo sapiens EWS protein.
          Length = 656

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>X66899-1|CAA47350.1|  656|Homo sapiens RNA binding protein protein.
          Length = 656

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>U35622-1|AAB03569.2|  478|Homo sapiens EWS protein/E1A enhancer
           binding protein chimera protein.
          Length = 478

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>CR456490-1|CAG30376.1|  655|Homo sapiens EWSR1 protein.
          Length = 655

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>BC072442-1|AAH72442.1|  655|Homo sapiens Ewing sarcoma breakpoint
           region 1 protein.
          Length = 655

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>BC011048-1|AAH11048.1|  655|Homo sapiens Ewing sarcoma breakpoint
           region 1 protein.
          Length = 655

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>BC004817-1|AAH04817.1|  656|Homo sapiens Ewing sarcoma breakpoint
           region 1 protein.
          Length = 656

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>BC000527-1|AAH00527.1|  354|Homo sapiens EWSR1 protein protein.
          Length = 354

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>AL031186-2|CAI18001.1|  656|Homo sapiens Ewing sarcoma breakpoint
           region 1 protein.
          Length = 656

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>AK056309-1|BAB71145.1|  661|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
           RNA-BINDING PROTEIN EWS. ).
          Length = 661

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 149 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 208

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 209 YDQSSYSQQNTYGQPSSYG 227


>AF327066-1|AAK11227.1|  476|Homo sapiens Ewings sarcoma EWS-Fli1
           (type 1) oncogene protein.
          Length = 476

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>AF254088-1|AAG09037.1|  609|Homo sapiens EWS/ZSG fusion protein
           long B isoform protein.
          Length = 609

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>AF254087-1|AAG09036.1|  713|Homo sapiens EWS/ZSG fusion protein
           long A isoform protein.
          Length = 713

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>AF254086-1|AAG09035.1|  609|Homo sapiens EWS/ZSG fusion protein
           short isoform protein.
          Length = 609

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 200 DKKRKAPQPQQQS----VPSLGHGSAKYSINTLDSSISRS--TGPPPYSET---ATELVT 250
           +K  +  QPQ  +     PSLG+G + YS   +  S      T PP Y  T   +T+  +
Sbjct: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202

Query: 251 LDASDATRDVSFGKPIDTG 269
            D S  ++  ++G+P   G
Sbjct: 203 YDQSSYSQQNTYGQPSSYG 221


>U05781-1|AAA74391.1|  540|Homo sapiens zona pellucida B protein
           protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 218 HGSAKYSI--NTLDSSISRSTGPPPYSETATELVTLDASDATRDVSFGKPIDTGTWDIVA 275
           H S  YS+  N+L  ++   T PPP+ ET    +TL+   A +D ++G     G + +V 
Sbjct: 282 HVSCSYSVSSNSLPINVQVFTLPPPFPETQPGPLTLELQIA-KDKNYGSYYGVGDYPVVK 340

Query: 276 EHREQL 281
             R+ +
Sbjct: 341 LLRDPI 346


>BC069521-1|AAH69521.1|  540|Homo sapiens zona pellucida
           glycoprotein 4 protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 218 HGSAKYSI--NTLDSSISRSTGPPPYSETATELVTLDASDATRDVSFGKPIDTGTWDIVA 275
           H S  YS+  N+L  ++   T PPP+ ET    +TL+   A +D ++G     G + +V 
Sbjct: 282 HVSCSYSVSSNSLPINVQVFTLPPPFPETQPGPLTLELQIA-KDKNYGSYYGVGDYPVVK 340

Query: 276 EHREQL 281
             R+ +
Sbjct: 341 LLRDPI 346


>AL359924-2|CAI22066.1|  540|Homo sapiens zona pellucida
           glycoprotein 4 protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 218 HGSAKYSI--NTLDSSISRSTGPPPYSETATELVTLDASDATRDVSFGKPIDTGTWDIVA 275
           H S  YS+  N+L  ++   T PPP+ ET    +TL+   A +D ++G     G + +V 
Sbjct: 282 HVSCSYSVSSNSLPINVQVFTLPPPFPETQPGPLTLELQIA-KDKNYGSYYGVGDYPVVK 340

Query: 276 EHREQL 281
             R+ +
Sbjct: 341 LLRDPI 346


>AB002361-1|BAA20818.1| 1522|Homo sapiens KIAA0363 protein.
          Length = 1522

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 57  LHQGSYMTGAYRTNRDDVSGYVSTPSPTKTLSPAMVKLP-GRKPCCLLTTRPTKSLGNLT 115
           L Q S       T +++ S  +   SP        + LP GRKP    T  P ++  +LT
Sbjct: 496 LGQESVTAEKLPTPQEETSLTLCPDSPQNLKEEGGLDLPSGRKPVAAATIVPRQAKEDLT 555

Query: 116 LATSSTMKAVPNQNTTDVSTDPR 138
           L   S M        TD+S+ P+
Sbjct: 556 LPQDSAMTPPLPLQDTDLSSAPK 578


>AK074928-1|BAC11298.1|  356|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90447 fis, clone NT2RP3001240, highly similar to
           Canis familiaris sec61 homologue mRNA. ).
          Length = 356

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 6   YNENLDNTVNYVATLAFFCGISCVTIMLKFGGFKASLNIFNSRKNGKEKT 55
           Y +NL N +N +AT+  F       +++ F GF+  L I ++R  G+  T
Sbjct: 115 YRQNLPNLMNLIATIFVF------AVVIYFQGFRVDLPIKSARYRGQYNT 158


>AF346602-1|AAK29083.1|  476|Homo sapiens Sec61 alpha form 1
           protein.
          Length = 476

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 6   YNENLDNTVNYVATLAFFCGISCVTIMLKFGGFKASLNIFNSRKNGKEKT 55
           Y +NL N +N +AT+  F       +++ F GF+  L I ++R  G+  T
Sbjct: 235 YRQNLPNLMNLIATIFVF------AVVIYFQGFRVDLPIKSARYRGQYNT 278


>AF084458-1|AAD39847.1|  476|Homo sapiens sec61 homolog protein.
          Length = 476

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 6   YNENLDNTVNYVATLAFFCGISCVTIMLKFGGFKASLNIFNSRKNGKEKT 55
           Y +NL N +N +AT+  F       +++ F GF+  L I ++R  G+  T
Sbjct: 235 YRQNLPNLMNLIATIFVF------AVVIYFQGFRVDLPIKSARYRGQYNT 278


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.311    0.127    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,722,584
Number of Sequences: 224733
Number of extensions: 1630382
Number of successful extensions: 3080
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3080
Number of HSP's gapped (non-prelim): 26
length of query: 313
length of database: 73,234,838
effective HSP length: 90
effective length of query: 223
effective length of database: 53,008,868
effective search space: 11820977564
effective search space used: 11820977564
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 65 (30.3 bits)

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