GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000877-TA|BGIBMGA000877-PA|undefined
         (313 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    33   0.51 
L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.     32   0.89 
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA...    32   0.89 
AE014298-484|AAF45840.1|  238|Drosophila melanogaster CG14421-PA...    31   2.1  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    30   3.6  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    30   3.6  
AB030450-1|BAA83106.1|  832|Drosophila melanogaster ABC transpor...    30   4.7  
DQ138884-1|ABA86490.1|  956|Drosophila melanogaster CG5669 protein.    29   6.3  
AY089533-1|AAL90271.1|  968|Drosophila melanogaster LD04007p pro...    29   6.3  
AE014298-1696|AAF48099.1|  135|Drosophila melanogaster CG15741-P...    29   6.3  
AE014297-3502|AAF56261.1|  968|Drosophila melanogaster CG5669-PA...    29   6.3  
BT023896-1|ABA81830.1|  721|Drosophila melanogaster LP17264p pro...    29   8.3  
AE014297-2698|AAF55692.2|  449|Drosophila melanogaster CG7432-PA...    29   8.3  

>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
           protein.
          Length = 881

 Score = 33.1 bits (72), Expect = 0.51
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 68  RTNRDDVSGYVSTPSPTKTLSPAMVKLPGRKPCC-LLTTRPTKSLGNLTLATSSTMKAVP 126
           R      +G  +TP P  T +P   K   + PC  ++T+  T      T  T+ T     
Sbjct: 93  RDTAQPCNGATTTPPPCATTTPPCTKTTTQTPCSGIITSTTTTPASTTTTTTTCTPTTTT 152

Query: 127 NQNTTDVST 135
             +TT  +T
Sbjct: 153 TTSTTTTTT 161


>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
          Length = 3503

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 232 ISRSTGPPPYSETATELVTLDASDATRDVSFGKPI-DTGTWDIVAEHREQLNRTTHAVDK 290
           ++R  G PP S TAT LVT+       DV+  +PI D   +++     E + R    V  
Sbjct: 529 VARDGGVPPLSSTATVLVTI------HDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSA 582

Query: 291 NDKQTVID--LNYSAGSDDK 308
           +D    ++  +NY+ G   K
Sbjct: 583 SDPDCGVNAMVNYTIGEGFK 602


>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
           protein.
          Length = 3556

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 232 ISRSTGPPPYSETATELVTLDASDATRDVSFGKPI-DTGTWDIVAEHREQLNRTTHAVDK 290
           ++R  G PP S TAT LVT+       DV+  +PI D   +++     E + R    V  
Sbjct: 582 VARDGGVPPLSSTATVLVTI------HDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSA 635

Query: 291 NDKQTVID--LNYSAGSDDK 308
           +D    ++  +NY+ G   K
Sbjct: 636 SDPDCGVNAMVNYTIGEGFK 655


>AE014298-484|AAF45840.1|  238|Drosophila melanogaster CG14421-PA
           protein.
          Length = 238

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 69  TNRDDVSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQ 128
           T   D+   +   S + T +P    LP         T PT S G  T  T+ T  + P  
Sbjct: 43  TQLTDLLNSLKGSSSSTTAAPTTTTLPSTSTVTTSPTGPTTSTGTSTTTTTPTTTS-PTG 101

Query: 129 NTTDVSTDPRGDGDRD 144
            TT    +P  D + D
Sbjct: 102 TTTARQLEPLDDQEDD 117


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 48   RKNGKEKTELHQGSYMTG-AYRTNRDDVSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTR 106
            R+  KEK    + +++   A+ T     S  +S P+P   L P  V  P   P  +L T+
Sbjct: 2744 REKDKEKDNKQKTNHIQKPAHPTTVPANSMPISAPAPVPVLVPTPVTTPKAAPIPVLITQ 2803

Query: 107  PTKS 110
            PT S
Sbjct: 2804 PTPS 2807


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
            protein.
          Length = 1286

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 37/190 (19%), Positives = 54/190 (28%), Gaps = 5/190 (2%)

Query: 79   STP-SPTKTLSPAMVKLPGRKPCCLLTTRPTKSL--GNLTLATSSTMKAVPNQNTTDVST 135
            +TP S TKT + A      R      T+RPT +      T  TS      P   TT  ++
Sbjct: 990  TTPRSTTKTSTCAPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPSTS 1049

Query: 136  DPRGDGDRDIKNPSHXXXXXXXXXXXXXXXXXQKAIERTTREQAXXXXXXXXXXXXXXXX 195
             P     R     S                    A   TT                    
Sbjct: 1050 RPTTTTPRSTTTTS--TSRPTTTTPRSTTKTSTCAPTTTTPRSTTTTTTSRPTTTTPRST 1107

Query: 196  XXXXDKKRKAPQPQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATELVTLDASD 255
                  +     P+  + P     +     +T  ++ SR T   P S T     T  ++ 
Sbjct: 1108 TTTTTSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCPTTTPSAS 1167

Query: 256  ATRDVSFGKP 265
             TR  +  +P
Sbjct: 1168 PTRTTTTRRP 1177


>AB030450-1|BAA83106.1|  832|Drosophila melanogaster ABC transporter
           protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 8/67 (11%)

Query: 79  STPSPTKTLSPAMV----KLPGRKPCCLLTTRPTKSL---GNLTLATSSTMKAVPNQNTT 131
           S P   K  S A++    K P R      TT P   L   GN++L+T ST    PN N  
Sbjct: 8   SVPLVDKCSSHAVILPAAKSPNRVSDSAATTAPNAVLYTSGNMSLSTLSTGSGNPNPN-P 66

Query: 132 DVSTDPR 138
           + ST+PR
Sbjct: 67  NASTNPR 73


>DQ138884-1|ABA86490.1|  956|Drosophila melanogaster CG5669 protein.
          Length = 956

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 30  TIMLKFGGFKASLNIFNSRKNGKEKTELHQGSYMTGAYRTNRDDVSGYVSTPSPTKTLSP 89
           T ++   G    + + N  +  ++  ++HQG+    A  TN    +G   T S T    P
Sbjct: 156 TQLITIPGTNIQIPVTNLIQQQQQAQQVHQGTVQQQAQGTNASGANGSGVTNSGTAGQLP 215

Query: 90  AMVKLPG 96
             + +PG
Sbjct: 216 GSITIPG 222


>AY089533-1|AAL90271.1|  968|Drosophila melanogaster LD04007p
           protein.
          Length = 968

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 30  TIMLKFGGFKASLNIFNSRKNGKEKTELHQGSYMTGAYRTNRDDVSGYVSTPSPTKTLSP 89
           T ++   G    + + N  +  ++  ++HQG+    A  TN    +G   T S T    P
Sbjct: 163 TQLITIPGTNIQIPVTNLIQQQQQAQQVHQGTVQQQAQGTNASGANGSGVTNSGTAGQLP 222

Query: 90  AMVKLPG 96
             + +PG
Sbjct: 223 GSITIPG 229


>AE014298-1696|AAF48099.1|  135|Drosophila melanogaster CG15741-PA
           protein.
          Length = 135

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 74  VSGYVSTPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSL--------GNLTLATSSTMKAV 125
           V+   S+ SP  + SPA    P        +T PT S          + + AT++T    
Sbjct: 15  VASSTSSTSPASSTSPASSTSPTSSTSPTSSTSPTSSTSPTSSSSSSSSSTATTTTTTVA 74

Query: 126 PNQNTTDVSTDPRGDGDRDIKNPSH 150
           P   TT  ++      D+ +++  H
Sbjct: 75  PTTTTTTEASSSSSSSDKKVRHTRH 99


>AE014297-3502|AAF56261.1|  968|Drosophila melanogaster CG5669-PA
           protein.
          Length = 968

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 30  TIMLKFGGFKASLNIFNSRKNGKEKTELHQGSYMTGAYRTNRDDVSGYVSTPSPTKTLSP 89
           T ++   G    + + N  +  ++  ++HQG+    A  TN    +G   T S T    P
Sbjct: 163 TQLITIPGTNIQIPVTNLIQQQQQAQQVHQGTVQQQAQGTNASGANGSGVTNSGTAGQLP 222

Query: 90  AMVKLPG 96
             + +PG
Sbjct: 223 GSITIPG 229


>BT023896-1|ABA81830.1|  721|Drosophila melanogaster LP17264p
           protein.
          Length = 721

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 80  TPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTDPRG 139
           T  PT T S      P +K     TTRPT     L L             TT+V  +P G
Sbjct: 395 TTRPTTTTSTTKATQPTKKSTVRPTTRPT---SGLVLIPQKKPPTTTTTTTTEVPLEPEG 451


>AE014297-2698|AAF55692.2|  449|Drosophila melanogaster CG7432-PA
           protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 80  TPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTDPRG 139
           T  PT T S      P +K     TTRPT     L L             TT+V  +P G
Sbjct: 123 TTRPTTTTSTTKATQPTKKSTVRPTTRPT---SGLVLIPQKKPPTTTTTTTTEVPLEPEG 179


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.311    0.127    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,238
Number of Sequences: 52641
Number of extensions: 605846
Number of successful extensions: 1631
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1617
Number of HSP's gapped (non-prelim): 22
length of query: 313
length of database: 24,830,863
effective HSP length: 85
effective length of query: 228
effective length of database: 20,356,378
effective search space: 4641254184
effective search space used: 4641254184
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)