Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000877-TA|BGIBMGA000877-PA|undefined
(313 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 32 0.61
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 32 0.61
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 32 0.61
Z73104-2|CAA97434.1| 479|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 29 3.2
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 29 3.2
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 29 3.2
U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine rece... 29 4.3
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z54237-9|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 29 5.7
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 28 7.5
U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z54237-8|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 28 9.9
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 9.9
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 9.9
AF039052-2|AAF98629.1| 400|Caenorhabditis elegans Hypothetical ... 28 9.9
AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical... 28 9.9
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical protein
Y37A1B.17b protein.
Length = 1467
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 203 RKAPQPQQQSVPSLGHGSAKYS---------INTLDSSISRSTGPPP-YSETATELVTLD 252
++APQ QQQ G G A Y+ ++T+D ST PPP YS T + T
Sbjct: 1180 QQAPQQQQQ--VQEGAGGANYNLDLDNLFSGLSTIDWGAKTSTAPPPLYSNTPLDTATSP 1237
Query: 253 ASDATRDVSF 262
A R V F
Sbjct: 1238 PVSAFRGVDF 1247
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical protein
Y37A1B.17a protein.
Length = 1538
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 203 RKAPQPQQQSVPSLGHGSAKYS---------INTLDSSISRSTGPPP-YSETATELVTLD 252
++APQ QQQ G G A Y+ ++T+D ST PPP YS T + T
Sbjct: 1180 QQAPQQQQQ--VQEGAGGANYNLDLDNLFSGLSTIDWGAKTSTAPPPLYSNTPLDTATSP 1237
Query: 253 ASDATRDVSF 262
A R V F
Sbjct: 1238 PVSAFRGVDF 1247
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 203 RKAPQPQQQSVPSLGHGSAKYS---------INTLDSSISRSTGPPP-YSETATELVTLD 252
++APQ QQQ G G A Y+ ++T+D ST PPP YS T + T
Sbjct: 1180 QQAPQQQQQ--VQEGAGGANYNLDLDNLFSGLSTIDWGAKTSTAPPPLYSNTPLDTATSP 1237
Query: 253 ASDATRDVSF 262
A R V F
Sbjct: 1238 PVSAFRGVDF 1247
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 203 RKAPQPQQQSVPSLGHGSAKYS---------INTLDSSISRSTGPPP-YSETATELVTLD 252
++APQ QQQ G G A Y+ ++T+D ST PPP YS T + T
Sbjct: 1180 QQAPQQQQQ--VQEGAGGANYNLDLDNLFSGLSTIDWGAKTSTAPPPLYSNTPLDTATSP 1237
Query: 253 ASDATRDVSF 262
A R V F
Sbjct: 1238 PVSAFRGVDF 1247
>Z73104-2|CAA97434.1| 479|Caenorhabditis elegans Hypothetical
protein K08D8.3 protein.
Length = 479
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 15 NYVATLAFFCG-ISCVTIMLKFGGFKASLNIFNSRKNGKEKTELHQGSYMTGAYRTNRDD 73
NYV A F G ++ +T+M+ G + SL ++NS+ T QG Y TN +
Sbjct: 394 NYVVRDADFTGNLTTLTVMILSKGQQVSLTVYNSKNLPPATTVSVQGDTYHIKYFTNGVN 453
Query: 74 VSGY 77
+G+
Sbjct: 454 TTGF 457
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 208 PQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATELVTLDAS 254
PQQ+ S + K + + S PPP S T++ L TLD S
Sbjct: 835 PQQEGWSSAAQEAYKLLVECGTNLKQASVSPPPMSPTSSRLSTLDRS 881
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 242 SETATELVTLDASDATRDVSFGKPIDTG 269
S TAT L T +D+T FGKPI G
Sbjct: 957 SSTATNLFTTKPADSTTSSIFGKPISFG 984
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 208 PQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATELVTLDAS 254
PQQ+ S + K + + S PPP S T++ L TLD S
Sbjct: 835 PQQEGWSSAAQEAYKLLVECGTNLKQASVSPPPMSPTSSRLSTLDRS 881
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 241 YSETATELVTLDASDATRDVSFGKPIDTGTWDIVAEHREQLNRTTHAVDKNDKQTVIDLN 300
Y E + +T++ASDA +D++F VAE + + ++ ++ V D++T+ D N
Sbjct: 95 YGEVTGDPITVEASDAIKDLNFK----------VAEAQRKPHQPSNIVLCKDQRTISDYN 144
Query: 301 YSAGS 305
GS
Sbjct: 145 IKNGS 149
>U53339-6|AAA96202.1| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 12 protein.
Length = 348
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 14 VNYVATLAFFCGISCVTIMLKFGGFKASLNIFNSRKNGKEKTEL 57
+NY +C +++ F GFKA LN N ++N K ++ +
Sbjct: 274 INYTVMRGVYCATPTYNLVIVFIGFKA-LNHLNFKRNNKVQSTI 316
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 43 NIFNSRKNGKEKTELHQGSYMTGAYRTNRDDVSGYVSTPSPTKTLSP 89
N ++ N + + H G ++ A+RT D+ + ST K LSP
Sbjct: 19 NCESTTSNSRRILDQHAGLPISSAFRTEASDIGHHFSTKMYFKILSP 65
>Z54237-9|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 200 DKKRKAPQPQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATE 247
D R +P P Q S S Y + + + + PPP ++T E
Sbjct: 378 DSNRLSPAPSQYSTQSRNQSQQHYQQHVVQAPPPVPSNPPPSNDTTAE 425
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 200 DKKRKAPQPQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATE 247
D R +P P Q S S Y + + + + PPP ++T E
Sbjct: 378 DSNRLSPAPSQYSTQSRNQSQQHYQQHVVQAPPPVPSNPPPSNDTTAE 425
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 79 STPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTDP 137
STPSP K +P P +KP + + ++ A S + K+ P +N+ + S P
Sbjct: 317 STPSPAKPATPTKTPTPTKKP--VENNETLSQVKTVSKALSHSPKS-PKKNSQEKSAPP 372
>U61944-3|AAB03119.1| 818|Caenorhabditis elegans Hypothetical
protein T12E12.3 protein.
Length = 818
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 224 SINTLDSSISRSTGPPPYSETATELVTLDASDATRDVSFGKPIDTGTWDIVAEHREQLNR 283
S+N L++SI+ ST E V L + ++DV FG D+ + E E +
Sbjct: 534 SVNNLENSITESTNDFTVFEGTAAAVLLPSEVVSQDV-FGSQSDSTVPESAPEPAEISSS 592
Query: 284 TTHAVDKNDK--QTVID 298
+ D N K Q V+D
Sbjct: 593 LVDSDDLNSKSAQQVLD 609
>Z54237-8|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 200 DKKRKAPQPQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATELVTLDASDATR 258
D R +P P Q S S Y + + + + PPP +E ++ + D+ R
Sbjct: 378 DSNRLSPAPSQYSTQSRNQSQQHYQQHVVQAPPPVPSNPPPSNEQQSQSRVQNLPDSVR 436
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 200 DKKRKAPQPQQQSVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATELVTLDASDATR 258
D R +P P Q S S Y + + + + PPP +E ++ + D+ R
Sbjct: 378 DSNRLSPAPSQYSTQSRNQSQQHYQQHVVQAPPPVPSNPPPSNEQQSQSRVQNLPDSVR 436
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 79 STPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTDP 137
STPS T+ S R ++ T PT + T+A++ST+ ++ T +T P
Sbjct: 220 STPSSTEASSTVTSTTTARTTTTMIPTTPTTT----TIASTSTVTSIVTSTTVTSTTVP 274
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 79 STPSPTKTLSPAMVKLPGRKPCCLLTTRPTKSLGNLTLATSSTMKAVPNQNTTDVSTDP 137
STPS T+ S R ++ T PT + T+A++ST+ ++ T +T P
Sbjct: 202 STPSSTEASSTVTSTTTARTTTTMIPTTPTTT----TIASTSTVTSIVTSTTVTSTTVP 256
>AF039052-2|AAF98629.1| 400|Caenorhabditis elegans Hypothetical
protein T22D1.8 protein.
Length = 400
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 212 SVPSLGHGSAKYS--INTLDSSISRSTGPPPYSETATELVTLDASDAT 257
S+P SA+Y+ ++ D S+S +T PPP S T+ VT+ ++ T
Sbjct: 295 SIPVYSCRSARYAACMDIRDPSVSTTTVPPPVSSTSIP-VTITSTVTT 341
>AC024810-10|AAF60767.1| 165|Caenorhabditis elegans Hypothetical
protein Y54E10A.13 protein.
Length = 165
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 212 SVPSLGHGSAKYSINTLDSSISRSTGPPPYSETATELVTLDASDATRDVSFGK 264
SVP+ G+ S +T S+ S G P T+ T SD+T DVS GK
Sbjct: 110 SVPTASGGARNGSPSTRSSTSSSIQGSPIAPTTSASQPTRP-SDSTADVSDGK 161
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,165,374
Number of Sequences: 27539
Number of extensions: 288117
Number of successful extensions: 797
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 787
Number of HSP's gapped (non-prelim): 25
length of query: 313
length of database: 12,573,161
effective HSP length: 81
effective length of query: 232
effective length of database: 10,342,502
effective search space: 2399460464
effective search space used: 2399460464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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