BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000876-TA|BGIBMGA000876-PA|IPR000734|Lipase, IPR013818|Lipase, N-terminal (250 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 30 0.37 SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 6.0 SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 25 7.9 >SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 669 Score = 29.9 bits (64), Expect = 0.37 Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 87 DPAGPCYRNMNPKDRFNAEGAVKVDALHTNIDGFGIADSIAQIDFYA 133 DP P RN+ P+D +GA + ++ + GFG+ QI F A Sbjct: 273 DPTVPWDRNLFPEDANARDGAALDNHIYMDSMGFGMGCCCLQITFQA 319 >SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosaccharomyces pombe|chr 3|||Manual Length = 877 Score = 25.8 bits (54), Expect = 6.0 Identities = 13/43 (30%), Positives = 20/43 (46%) Query: 62 AHIGYYASVKYYELTSRKPARLTGLDPAGPCYRNMNPKDRFNA 104 +HI +AS + + P L+ PA P N NP F++ Sbjct: 212 SHISPFASGSFSPFATSSPNFLSTSTPAPPNSNNANPSTLFSS 254 >SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 649 Score = 25.4 bits (53), Expect = 7.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Query: 210 IYYLPTKEVSPYYLGNE 226 +YYLP KE + Y G E Sbjct: 525 VYYLPNKEANTYNAGKE 541 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.322 0.141 0.442 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,153,594 Number of Sequences: 5004 Number of extensions: 46761 Number of successful extensions: 83 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80 Number of HSP's gapped (non-prelim): 3 length of query: 250 length of database: 2,362,478 effective HSP length: 71 effective length of query: 179 effective length of database: 2,007,194 effective search space: 359287726 effective search space used: 359287726 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 53 (25.4 bits)
- SilkBase 1999-2023 -