GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000876-TA|BGIBMGA000876-PA|IPR000734|Lipase,
IPR013818|Lipase, N-terminal
         (250 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)              85   4e-17
SB_26408| Best HMM Match : Lipase (HMM E-Value=0)                      77   1e-14
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)                  66   3e-11
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)            54   1e-07
SB_11616| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.13 
SB_40960| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_52586| Best HMM Match : Hexokinase_2 (HMM E-Value=0.85)             28   6.4  
SB_29493| Best HMM Match : PH (HMM E-Value=0.48)                       28   8.4  

>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 940

 Score = 85.4 bits (202), Expect = 4e-17
 Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 55  IVGGSLGAHIGYYASVKYYELTSRKPARLTGLDPAGPCYRNMNPKDRFNAEGAVKVDALH 114
           +VG SLGAHI  Y   +  + T +K  R+TGLDPA   + N +   R +   A  VD +H
Sbjct: 691 LVGFSLGAHISGYVGRRIAK-TGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMH 749

Query: 115 TNIDGFGIADSIAQIDFYANGGEFQPALAGDFIMPC-FQLCSHVRAAMYWILAYTNPDKF 173
           T++D  G       IDFY NGG+ QP        P  + +C H+RA  Y+  + T     
Sbjct: 750 TDMDLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVTTTCPM 809

Query: 174 LAVRCDSVADVRHGDCYD 191
           LA  C S+ D   G C+D
Sbjct: 810 LAFPCTSMDDFERGYCFD 827


>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
          Length = 714

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 8/175 (4%)

Query: 52  HLEIVGGSLGAHIGYYASVKYYELTSRKPARLTGLDPAGPCYRNMNPKDRFNAEGAVKVD 111
           ++ ++G S GAH+  Y   +  +   R   R+T LDPA   +   +   R +   A+ VD
Sbjct: 190 YVHVIGFSFGAHVAGYVG-RRMKKRGRMIDRITALDPAAMWFHKHHEDVRLDTSDALFVD 248

Query: 112 ALHTNIDGFGIADSIAQIDFYANGGEFQPALAGDFI-MPCFQLCSHVRA-AMYWILAYTN 169
            +HT+ D +GI  +I   DFY NGG+ QP     F     +  C H RA A++    YT 
Sbjct: 249 VIHTSAD-YGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCGHKRAPALFTTSLYTK 307

Query: 170 PDKFLAVRCDSVADVRHGDCY--DGNITSNVLGPRTEFNE-PGIYYLPTKEVSPY 221
              + +  C S  D   G+C   DG   +      T+ N   G +Y  T + +PY
Sbjct: 308 TPLY-SYPCRSEDDFNSGNCLKCDGKCPTMGFRLDTKNNTLSGSFYFRTTDTAPY 361


>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
          Length = 408

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 5/141 (3%)

Query: 86  LDPAGPCYRNMNPKDRFNAEGAVKVDALHTNIDGFGIADSIAQIDFYANGGEFQPALAGD 145
           LDPAG  + N +   R +   A  VD +HT++D  G +     IDFY NGG+ QP     
Sbjct: 2   LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTDMDFAGTSTQSGHIDFYPNGGKNQPGCRDI 61

Query: 146 FIMPCFQL-CSHVRAAMYWILAYTNPDKFLAVRCDSVADVRHGDCYD--GNI--TSNVLG 200
              P   L C HVRA  Y+  + T+     A  C S+ D   G C+D   N+  ++    
Sbjct: 62  ADGPSNALKCDHVRAHDYFTESITSQCAMRAFPCASMHDFERGLCFDCVNNLCPSAGYNA 121

Query: 201 PRTEFNEPGIYYLPTKEVSPY 221
            +++    G Y+L T    P+
Sbjct: 122 VKSKGKAKGKYFLYTNRDEPF 142


>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
          Length = 291

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 56  VGGSLGAHIGYYASVKYYELTSRKPARLTGLDPAGPCYRNMNPKDRFNAEGAVKVDALHT 115
           +G SLGAHI  Y   +   +  R   R+TGLDPA   ++   P  R +   A  VD +HT
Sbjct: 176 IGFSLGAHISGYVGQRLKRI-GRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHT 234

Query: 116 NIDGFGIADSIAQIDFYANGGEFQ 139
           +   FGI      +DFY NGG  Q
Sbjct: 235 SY-VFGITAPHGHMDFYPNGGTSQ 257


>SB_11616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 81

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 151 FQLCSHVRAAMYWILAYTNPDKFLAVRCDSVADVRHGDCYD 191
           + +C H+RA  Y+  + T     LA  C S+ D   G C+D
Sbjct: 5   YVICDHMRAPEYYAESVTTTCPMLAFPCTSMDDFERGYCFD 45


>SB_40960| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 108

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 60 LGAHIGYYASVKYYELTSRKPARLTGLDPAGPC 92
          LG HI    S+  Y L  R+P RL G DP  PC
Sbjct: 58 LGNHILNVVSINSYPLIPRRPRRL-GKDPDCPC 89


>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 383

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 164 ILAYTNPDKFLAVRCDSVADVRHGDCYDGNITSNVLGPRTEFNEPG-IYYLPTKEVSPYY 222
           I++ T P     +  + +A  RH       I S VLGP T F+E G   Y    ++   Y
Sbjct: 11  IVSVTIPSSLAVLLEELIASERH----HMKIVSRVLGPNTNFSEDGKAQYATVGDIDNQY 66

Query: 223 LGNEGLKKSM 232
              E L K +
Sbjct: 67  ESPEKLSKEL 76


>SB_52586| Best HMM Match : Hexokinase_2 (HMM E-Value=0.85)
          Length = 356

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 80  PARLTGLDPAGPCYRNMNPKDRFNAEGAVKVDALHTNIDGFGIADSI 126
           PA +T ++     YRN NP   F       +D + T++ G  I +S+
Sbjct: 24  PASITHMEILHAAYRNKNPNAAFMIRDPAFLDEIPTDMKGAFIDNSV 70


>SB_29493| Best HMM Match : PH (HMM E-Value=0.48)
          Length = 1064

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/50 (28%), Positives = 20/50 (40%)

Query: 168 TNPDKFLAVRCDSVADVRHGDCYDGNITSNVLGPRTEFNEPGIYYLPTKE 217
           T  D F  +   ++ D+ H    DG     V    T    P IYY  T++
Sbjct: 282 TRKDNFKCLGKWNLVDLPHYGAVDGGFAFQVKDETTSHGLPSIYYFATRQ 331


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.322    0.141    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,460,414
Number of Sequences: 59808
Number of extensions: 332759
Number of successful extensions: 434
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 421
Number of HSP's gapped (non-prelim): 9
length of query: 250
length of database: 16,821,457
effective HSP length: 80
effective length of query: 170
effective length of database: 12,036,817
effective search space: 2046258890
effective search space used: 2046258890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)