GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000876-TA|BGIBMGA000876-PA|IPR000734|Lipase,
IPR013818|Lipase, N-terminal
         (250 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    28   0.093
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   0.66 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   0.66 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   0.66 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   1.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   1.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.1  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 27.9 bits (59), Expect = 0.093
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 210 IYYLPTKEVSPYYLGNEGLKKSMYGVNAYLLKPAPDI 246
           +YY P    S YY+  +   KS YG N    +   DI
Sbjct: 266 LYYSPLSSRSLYYVNTKPFMKSEYGANNVQYQGVQDI 302


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 191 DGNITSNVLGPRTEFNEPGIYYLPTKEVSPYYLGNEGLKKSMYGVN 236
           DG I+   L P T      +YY P    S YY+  E  + S Y  N
Sbjct: 251 DG-ISGMALSPMTN----NLYYSPVASTSLYYVNTEQFRTSDYQQN 291


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 191 DGNITSNVLGPRTEFNEPGIYYLPTKEVSPYYLGNEGLKKSMYGVN 236
           DG I+   L P T      +YY P    S YY+  E  + S Y  N
Sbjct: 251 DG-ISGMALSPMTN----NLYYSPVASTSLYYVNTEQFRTSDYQQN 291


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 5/46 (10%)

Query: 191 DGNITSNVLGPRTEFNEPGIYYLPTKEVSPYYLGNEGLKKSMYGVN 236
           DG I+   L P T      +YY P    S YY+  E  + S Y  N
Sbjct: 251 DG-ISGMALSPMTN----NLYYSPVASTSLYYVNTEQFRTSDYQQN 291


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 210 IYYLPTKEVSPYYLGNEGLKKSMYGVN 236
           +YY P    S YY+  E   KS Y  N
Sbjct: 266 LYYSPLTSHSLYYVNMEPFMKSQYEEN 292


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 210 IYYLPTKEVSPYYLGNEGLKKSMYGVNAYLLKPAPDI 246
           +YY P      YY+      KS +G N    + + DI
Sbjct: 263 LYYSPLASHGLYYVNTAPFMKSQFGENNVQYQGSEDI 299


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 104 AEGAVKVDALHTNIDGF 120
           AEGA+ V+    NI GF
Sbjct: 247 AEGAITVELQSENIPGF 263


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 104 AEGAVKVDALHTNIDGF 120
           AEGA+ V+    NI GF
Sbjct: 337 AEGAITVELQSENIPGF 353


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.141    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,339
Number of Sequences: 429
Number of extensions: 3342
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 8
length of query: 250
length of database: 140,377
effective HSP length: 56
effective length of query: 194
effective length of database: 116,353
effective search space: 22572482
effective search space used: 22572482
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)