BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000874-TA|BGIBMGA000874-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR001630|cAMP response element
binding (CREB) protein, IPR002112|Transcription factor Jun,
IPR008917|Eukaryotic transcription factor, DNA-binding, IPR011616|bZIP
transcription factor, bZIP_1
(216 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 0.074
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 31 0.17
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.30
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 29 0.52
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.52
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 28 0.91
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 27 1.6
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.6
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 1.6
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 27 1.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.1
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 2.8
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 27 2.8
SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family |S... 26 3.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 4.9
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 26 4.9
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 25 8.5
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 25 8.5
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 8.5
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 25 8.5
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 31.9 bits (69), Expect = 0.074
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 169 DQLERKVEILISENDDYRKRVET----LEQKNASLLSQVASLQA 208
D+ R++E IS+ DD +KR+++ LE++NA L +Q+ +QA
Sbjct: 2000 DRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQLEDVQA 2043
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 30.7 bits (66), Expect = 0.17
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 156 SAQESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASL 199
+A + R++KK+++ L+ KVE +EN+ +V L ++ SL
Sbjct: 485 AALKCRQRKKQWLSNLQAKVEFYGNENEILSAQVSALREEIVSL 528
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 29.9 bits (64), Expect = 0.30
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 159 ESRRKKKEYMD-------QLERKVEILISENDDYRKRVETLEQKNASLLSQ 202
E +K+KE M+ +LER+VE L E D Y+ VET +K A++ +
Sbjct: 124 EDLKKEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKE 174
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 29.1 bits (62), Expect = 0.52
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 156 SAQESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQV 203
+AQ+ R KKK+Y+ L+ +V SEN + + L ++ L + V
Sbjct: 134 AAQKCRIKKKKYLQTLQDQVNYYTSENKELLQSANDLREEIIKLRTLV 181
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 29.1 bits (62), Expect = 0.52
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 156 SAQESRRKKKEY-MDQLERKVEILISENDDYRKRVETLEQKNASLLSQ 202
S ES+ +KE + ++ K ++SE DD KR+ L+ + SLL +
Sbjct: 331 SELESKISEKENELSEILPKYNAIVSEADDLNKRIMLLKNQKQSLLDK 378
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 28.3 bits (60), Expect = 0.91
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 162 RKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQVASLQAMV 210
++ ++ L+ E S N++ R++TLE++N + Q+ S+Q +
Sbjct: 430 KRVSSQLEHLKHNYEEEKSMNENLLVRIQTLEKQNTTKSDQIVSMQFQI 478
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 156 SAQESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQVASLQ 207
+A + R+KKKE++ +LE+ ++ + + L+Q+ L SQ+ + Q
Sbjct: 23 AASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQEAFRLKSQLLAHQ 74
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 159 ESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQ 202
E +++ K +++LE + E SE + Y K+ E LE++ L ++
Sbjct: 153 EEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYEELRNE 196
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 158 QESRRKKKEYMDQLE--RKVEILISENDD-YRKRVETLEQKNASLLSQ 202
++ R +KKE + LE + +E ++ N+ ++K++ +L +NA L +Q
Sbjct: 577 EKLRLEKKEQLSYLEILKVIEQMLESNEQKFKKQIVSLASENAKLAAQ 624
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 172 ERKVEILISENDDYRKRVETLEQKNASLLSQVASLQAMV 210
E+ +E +E +DYR +VE LE K + + ++ SL + +
Sbjct: 81 EKLLEQEQNEANDYRLKVERLEHKISDYVQEINSLNSQL 119
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 172 ERKVEILISENDDYRKRVETLEQKNASLLSQVASLQAM 209
E+K L EN+D R ++ LE+ N SL+ + + ++
Sbjct: 650 EQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSL 687
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/45 (28%), Positives = 29/45 (64%)
Query: 165 KEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQVASLQAM 209
K+Y+ LE + ++L S+ D +++ L+Q ++ L+ A+L+A+
Sbjct: 1150 KDYILGLENQNKLLHSQFDSLSQQITVLQQNSSENLNISANLEAV 1194
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 160 SRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQVASLQAMV 210
S + E + + + +E + ++YR +V TLE +N + +++ S ++++
Sbjct: 262 SNNRNVEILKEEKNDLESKLYRFEEYRDKVATLELENEKIQTELNSWKSLI 312
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 156 SAQESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQVASLQAMVARGAR 215
+A + R+KKK + LE+ I ++ R V L ++ L +Q+ + Q G R
Sbjct: 280 AASKCRQKKKLWTQNLEKTAHIACEQSKALRILVSQLREEVICLKNQLLAHQDCNCEGIR 339
Query: 216 K 216
+
Sbjct: 340 Q 340
>SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 373
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 159 ESRRKKKEYMDQLERKVEILISENDD 184
ES+RK E +D +K +L E DD
Sbjct: 24 ESKRKSSENIDSESKKTNLLEDEQDD 49
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 158 QESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKN 196
+E K + + QL + E D+ +KR++TLE++N
Sbjct: 598 KEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEEN 636
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 4.9
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 111 GTLVLTDEEKRTLLAEGYPVPTRLPLTKAEEKSLXXXXXXXXXXXSAQESRRKKKEYMDQ 170
GTL L D L+ V RL T+A KSL +A S K+K ++
Sbjct: 715 GTLNLVDLAGSERLSYSQAVGDRLRETQAINKSLSCLGDVIHALGNASNSTTKEKSHIPY 774
Query: 171 LERKVEILI 179
K+ L+
Sbjct: 775 RNSKLTYLL 783
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 159 ESRRKKKEYMDQLERKVEILISENDDYRKRVETLEQKNASLLSQV 203
E R+ + ER+V+ L E DD +++E + K + +++
Sbjct: 107 EKMRQTDVKAEHFERRVQSLERERDDMEQKLEEMTDKYTKVKAEL 151
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/79 (17%), Positives = 32/79 (40%)
Query: 117 DEEKRTLLAEGYPVPTRLPLTKAEEKSLXXXXXXXXXXXSAQESRRKKKEYMDQLERKVE 176
DE + P +P+ +E+ + R + +D+L+ K+E
Sbjct: 263 DENGNAKEHDRLPELNTIPVASTDEQLFNAHQLLEKKFEILKRERNECNAKIDELQDKLE 322
Query: 177 ILISENDDYRKRVETLEQK 195
+L + ++R +LE++
Sbjct: 323 LLTDAYNREKRRARSLEER 341
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 89 VSHHTRQPINTPLISSQPKGST 110
VS ++QP++ P++SS+P +T
Sbjct: 84 VSLQSQQPLSKPVVSSKPNQTT 105
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 158 QESRRKKKEYMDQLERKVEILISENDDYRKR 188
+E R+K+KE ++LE E+ + N+ R+R
Sbjct: 459 EEYRKKQKELQEELEFPDEVELQPNELARER 489
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.308 0.124 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,357
Number of Sequences: 5004
Number of extensions: 19974
Number of successful extensions: 109
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77
Number of HSP's gapped (non-prelim): 31
length of query: 216
length of database: 2,362,478
effective HSP length: 70
effective length of query: 146
effective length of database: 2,012,198
effective search space: 293780908
effective search space used: 293780908
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -