GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000873-TA|BGIBMGA000873-PA|undefined
         (83 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P29747 Cluster: Cyclic AMP response element-binding pro...    65   2e-10
UniRef50_UPI0000D572A5 Cluster: PREDICTED: similar to CG7450-PA,...    64   7e-10
UniRef50_Q7PTJ1 Cluster: ENSANGP00000003100; n=1; Anopheles gamb...    59   1e-08
UniRef50_Q1D884 Cluster: Putative uncharacterized protein; n=1; ...    31   3.3  
UniRef50_A2XC63 Cluster: Putative uncharacterized protein; n=2; ...    31   3.3  
UniRef50_Q86V42 Cluster: Protein FAM124A; n=19; Tetrapoda|Rep: P...    31   3.3  
UniRef50_A0VQH2 Cluster: Sporulation domain protein; n=1; Dinoro...    31   4.4  
UniRef50_Q4S840 Cluster: Chromosome 9 SCAF14710, whole genome sh...    31   5.8  
UniRef50_Q74ZU4 Cluster: AGR104Wp; n=1; Eremothecium gossypii|Re...    31   5.8  

>UniRef50_P29747 Cluster: Cyclic AMP response element-binding
          protein A; n=4; Sophophora|Rep: Cyclic AMP response
          element-binding protein A - Drosophila melanogaster
          (Fruit fly)
          Length = 516

 Score = 65.3 bits (152), Expect = 2e-10
 Identities = 31/58 (53%), Positives = 40/58 (68%), Gaps = 1/58 (1%)

Query: 4  ILDEDERSDWLIERDSKSG-VVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAPPSP 60
          I  + +  DWL +RD K   V+L+D+L++DA L    PIKTEHSYSL SDV+S P SP
Sbjct: 23 ISPDHDMHDWLFDRDVKDPTVILNDKLISDALLNGTQPIKTEHSYSLSSDVDSLPDSP 80


>UniRef50_UPI0000D572A5 Cluster: PREDICTED: similar to CG7450-PA,
          isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
          similar to CG7450-PA, isoform A - Tribolium castaneum
          Length = 331

 Score = 63.7 bits (148), Expect = 7e-10
 Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 2/56 (3%)

Query: 12 DWLIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAPPSP-HHTKVD 66
          +W        GV++HDRLMTDAALG   PIKTEHSYSL SD +S P SP  H K++
Sbjct: 14 EWSYMEKDLPGVIIHDRLMTDAALGTR-PIKTEHSYSLASDGDSLPDSPISHNKLE 68


>UniRef50_Q7PTJ1 Cluster: ENSANGP00000003100; n=1; Anopheles
          gambiae str. PEST|Rep: ENSANGP00000003100 - Anopheles
          gambiae str. PEST
          Length = 487

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 6/62 (9%)

Query: 12 DWLIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVES----APPSPH--HTKV 65
          DW+        V+L+D+LMTDA +G   PIKTEHSYSL+SD +S     P SPH    K+
Sbjct: 13 DWMDPHSKLPPVILNDKLMTDAIIGTCMPIKTEHSYSLNSDGDSLPDTIPDSPHSLQNKM 72

Query: 66 DA 67
          DA
Sbjct: 73 DA 74


>UniRef50_Q1D884 Cluster: Putative uncharacterized protein; n=1;
           Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
           protein - Myxococcus xanthus (strain DK 1622)
          Length = 397

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 27  DRLMTDAALGAAAPIKTEHSYSLHSDVESAPP 58
           +RL  +A LGA A + T  + +L  +VE+APP
Sbjct: 298 ERLDVEAGLGAGAVVFTRRTQALTEEVEAAPP 329


>UniRef50_A2XC63 Cluster: Putative uncharacterized protein; n=2;
          Oryza sativa|Rep: Putative uncharacterized protein -
          Oryza sativa subsp. indica (Rice)
          Length = 187

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 33 AALGAAAPIKTEHSYSLHSDVESAPPSPHHTKVDAIFMSAPYI 75
          AA  A  P  T  +  +H D   APPSP   KV A    AP +
Sbjct: 27 AAPAATTPAVTTTTTVIHDDGAPAPPSPKRRKVAAAAAPAPAV 69


>UniRef50_Q86V42 Cluster: Protein FAM124A; n=19; Tetrapoda|Rep:
           Protein FAM124A - Homo sapiens (Human)
          Length = 546

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query: 11  SDWLIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAPPSP 60
           S W   +DS+ G +     +T  A  A+ P  T+ S S  +   +APP+P
Sbjct: 452 SHWAAHKDSREGPLPTVSRVTTEASWASLPFFTKRSSSSSATARAAPPAP 501


>UniRef50_A0VQH2 Cluster: Sporulation domain protein; n=1;
           Dinoroseobacter shibae DFL 12|Rep: Sporulation domain
           protein - Dinoroseobacter shibae DFL 12
          Length = 268

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 34  ALGAAAPIKTEHSYSLHSDVESAPPSPHHTKVDAIFMSAPYIQIGI 79
           A+ AAA  + E      +D  +APPSP      +  ++ PYIQIGI
Sbjct: 157 AIAAAAIAEAELDEDT-TDTAAAPPSPAPALAASSTLARPYIQIGI 201


>UniRef50_Q4S840 Cluster: Chromosome 9 SCAF14710, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
           SCAF14710, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 1167

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 17  RDSKSGVVLHDRLMTDAALGAA--APIKTE--------HSYSLHSDVESAPPSPHHTKVD 66
           R S++GV    +   +   G     PIK E        HS+ LH   ++ PP  H+ K  
Sbjct: 688 RSSQNGVAAEPQNKKNHIFGGGKGVPIKDEVPAGFPHPHSHLLHQQPQTQPPPLHYAKPS 747

Query: 67  AIFMSAPY 74
           A FM   Y
Sbjct: 748 AFFMDPIY 755


>UniRef50_Q74ZU4 Cluster: AGR104Wp; n=1; Eremothecium gossypii|Rep:
           AGR104Wp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 833

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 3   DILDEDERSDWLIERDSKSGVVLHDRLMT--DAALGAAAPIKTEHSYSLHSDVES 55
           D  D+DE  D++ E D      +HD+  T   A      PI  + SY L SD ES
Sbjct: 699 DYSDDDETEDYITEDDITDSDSIHDQQPTFPIAKNSIDTPIIADASYLLDSDRES 753


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.317    0.132    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,344,077
Number of Sequences: 1657284
Number of extensions: 3040298
Number of successful extensions: 8759
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8749
Number of HSP's gapped (non-prelim): 9
length of query: 83
length of database: 575,637,011
effective HSP length: 62
effective length of query: 21
effective length of database: 472,885,403
effective search space: 9930593463
effective search space used: 9930593463
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)