Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000873-TA|BGIBMGA000873-PA|undefined
(83 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1098 - 8691312-8692430,8692640-8693509,8694522-8696105,869... 29 0.62
09_02_0044 - 3471301-3471471,3471804-3472257,3475905-3476341 28 1.1
04_04_1012 - 30104401-30104955,30105066-30106841 27 1.9
04_04_1005 - 30043698-30044252,30044363-30046138 27 1.9
11_04_0153 + 14159820-14162417 27 2.5
03_02_0504 - 8976973-8979414 27 2.5
04_01_0221 + 2795975-2796836,2797001-2797517,2797967-2798516 26 3.3
11_06_0693 - 26334574-26336121 26 4.3
11_06_0176 + 20929629-20929791,20929918-20930333,20930449-209307... 26 4.3
08_01_0663 + 5721902-5723176,5724162-5724233,5724405-5724560,572... 26 4.3
05_01_0474 - 3797926-3798609 26 4.3
10_03_0015 - 7079715-7079898,7080107-7080362,7080858-7081740 25 5.7
07_01_0517 - 3854875-3855120,3855944-3856144 25 5.7
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 25 5.7
04_02_0034 - 8999618-9000358,9001439-9001618,9001666-9003621,900... 25 5.7
01_06_0932 - 33147656-33148098,33148631-33148675,33148815-331489... 25 5.7
12_02_1147 - 26459481-26460124,26460241-26460382,26461658-264616... 25 7.6
09_04_0675 - 19379716-19380285,19380380-19380571,19381742-19381975 25 7.6
05_05_0387 + 24577448-24577638,24580375-24580767,24581078-245812... 25 7.6
03_01_0438 + 3399203-3399297,3399389-3399480,3399638-3399750,340... 25 7.6
01_05_0019 + 17219759-17219819,17219917-17220231,17220997-17221112 25 7.6
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 25 7.6
>01_01_1098 -
8691312-8692430,8692640-8693509,8694522-8696105,
8696199-8696258,8696336-8696414,8696494-8696555,
8697129-8697204,8697367-8697419,8698181-8698270,
8698411-8698458
Length = 1346
Score = 28.7 bits (61), Expect = 0.62
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 27 DRLMTDAALGAAAPIKTEHSYSLHSDVESAPPS 59
D L + + A IKTEH+ S + DV + PPS
Sbjct: 433 DMLTDEGPVKAETMIKTEHNCSENLDVVATPPS 465
>09_02_0044 - 3471301-3471471,3471804-3472257,3475905-3476341
Length = 353
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 14 LIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAP 57
L E S +H + T A A I +EHS + S+ +SAP
Sbjct: 74 LFEEMSDHADTMHTSVATGATTATANTISSEHSGTDDSEAQSAP 117
>04_04_1012 - 30104401-30104955,30105066-30106841
Length = 776
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 1 MHDILDEDERSDWLIERDSKSGVVLHD 27
+HD D D+ DW ERD + G D
Sbjct: 326 LHDEGDHDDEDDWDGERDDRDGCADRD 352
>04_04_1005 - 30043698-30044252,30044363-30046138
Length = 776
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 1 MHDILDEDERSDWLIERDSKSGVVLHD 27
+HD D D+ DW ERD + G D
Sbjct: 326 LHDEGDHDDEDDWDGERDDRDGCADRD 352
>11_04_0153 + 14159820-14162417
Length = 865
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 9 ERSDWLIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESA 56
E + L+ D G +L L+ GAAA + H YS+ + SA
Sbjct: 605 EHGEMLVVYDYSPGNLLSHHLLRRDGAGAAAVLPWRHRYSIVKALASA 652
>03_02_0504 - 8976973-8979414
Length = 813
Score = 26.6 bits (56), Expect = 2.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MHDILDEDERSDWLIERDSKSG 22
+HD D D+ DW ERD + G
Sbjct: 326 LHDEGDHDDEDDWDGERDDRDG 347
>04_01_0221 + 2795975-2796836,2797001-2797517,2797967-2798516
Length = 642
Score = 26.2 bits (55), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 33 AALGAAAPIKTEHSYSLHSDVESAPPSPHHTKVDAIFMS 71
AA GAA + HS+S +S + +AP H K A+ +S
Sbjct: 261 AATGAAFELHQIHSWSFNSTI-AAPVQKDHKKAIAVGVS 298
>11_06_0693 - 26334574-26336121
Length = 515
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 46 SYSLHSDVESAPPSPHHTKVDA-IFMSAP 73
++++ + S+PPSPHH + A + +S+P
Sbjct: 48 AFAVRHCLPSSPPSPHHHSLAALLLLSSP 76
>11_06_0176 +
20929629-20929791,20929918-20930333,20930449-20930736,
20931034-20931147,20931245-20931352,20931701-20931744,
20933106-20933200,20934103-20934182,20934278-20934391,
20934476-20934628,20934740-20934832
Length = 555
Score = 25.8 bits (54), Expect = 4.3
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 4 ILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAP 57
I ED+RS+ L+E + S + L D + D + +A ++T+ + + + V+ P
Sbjct: 371 IAGEDKRSEVLVENANPSDLELID--VEDNGVKPSATLETKGTSNYQNSVQDVP 422
>08_01_0663 +
5721902-5723176,5724162-5724233,5724405-5724560,
5724655-5724844,5725173-5725255
Length = 591
Score = 25.8 bits (54), Expect = 4.3
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 3 DILDEDERSDWLIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVES 55
D L EDER E D+K+ +D+++T++ + E++Y SD++S
Sbjct: 311 DFLHEDERGSSDDEDDNKTISDHYDKMVTNSDACGDGNLVDEYNYG--SDIDS 361
>05_01_0474 - 3797926-3798609
Length = 227
Score = 25.8 bits (54), Expect = 4.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 20 KSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAPPSP 60
K G L+ R+M+ A AAAP+ S+ ++ V SA P
Sbjct: 13 KEGSKLYSRMMSKEAAAAAAPLAVP-SFRVYYGVASAGSVP 52
>10_03_0015 - 7079715-7079898,7080107-7080362,7080858-7081740
Length = 440
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 12 DWLIERDSKSGVVLHDRLMTDAALGAAAPIKT 43
DWLI ++ +G+ L R DAA G A KT
Sbjct: 160 DWLILQNFYNGLTLMSRDHLDAAAGGAFFSKT 191
>07_01_0517 - 3854875-3855120,3855944-3856144
Length = 148
Score = 25.4 bits (53), Expect = 5.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 49 LHSDVESAPPSPHHTKVD 66
LH ++ PP+P HT VD
Sbjct: 16 LHCPLQKLPPAPPHTVVD 33
>06_01_0194 +
1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 1 MHDILDEDERSDWLIERDSKSGV 23
M +IL E+E D +E D KSG+
Sbjct: 453 MDNILKEEEEMDADLENDEKSGI 475
>04_02_0034 -
8999618-9000358,9001439-9001618,9001666-9003621,
9004647-9004786,9004871-9005282,9006399-9006638
Length = 1222
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 12 DWLIERDSKSGVVLHDRLMTDAALGAAAPIKT 43
DWLI ++ +G+ L R DAA G A KT
Sbjct: 383 DWLILQNFYNGLTLMSRDHLDAAAGGAFFSKT 414
>01_06_0932 -
33147656-33148098,33148631-33148675,33148815-33148945,
33149192-33149817
Length = 414
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 7 EDERSDWLIERDSKSGVVLHDRLM 30
EDE +DW+IER + +L D M
Sbjct: 310 EDEVTDWMIERFRQKDQLLSDFFM 333
>12_02_1147 -
26459481-26460124,26460241-26460382,26461658-26461699,
26463377-26463502
Length = 317
Score = 25.0 bits (52), Expect = 7.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 32 DAALGAAAPIKTEHSYSLHSDVESAPPSP 60
DA A AP TE + ++ E+APP+P
Sbjct: 208 DADTPAPAPAGTEKEDAKPAESEAAPPAP 236
>09_04_0675 -
19379716-19380285,19380380-19380571,19381742-19381975
Length = 331
Score = 25.0 bits (52), Expect = 7.6
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 30 MTDAALGAAAPIKTEHSYSLHSDVESAPPSPHHTKVDAIFMSAP 73
M AA G AA + EH S VES S KV F++ P
Sbjct: 22 MAAAAGGEAARLSPEHYRSTCPGVESVVRSVVARKVKETFVTVP 65
>05_05_0387 +
24577448-24577638,24580375-24580767,24581078-24581208,
24581460-24581899
Length = 384
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 7 EDERSDWLIERDSKSGVVLHD 27
EDE +DWLIER +L D
Sbjct: 281 EDEVADWLIERFKLKNKLLSD 301
>03_01_0438 + 3399203-3399297,3399389-3399480,3399638-3399750,
3400345-3400610,3400793-3400864,3401023-3401098,
3401241-3401339,3401432-3401586,3401679-3401783,
3401880-3401966,3402459-3402543,3402626-3402734,
3403468-3403544,3403635-3403715,3404137-3404328,
3404415-3404528,3404650-3404742,3404864-3404990,
3405075-3405151,3405455-3405502,3405588-3405657,
3405737-3405810,3405895-3406005,3406222-3406300,
3406936-3408320
Length = 1293
Score = 25.0 bits (52), Expect = 7.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 49 LHSDVESAPPSPHHTKVD 66
LHSD+ PP P T +D
Sbjct: 1098 LHSDLMKTPPKPPRTGID 1115
>01_05_0019 + 17219759-17219819,17219917-17220231,17220997-17221112
Length = 163
Score = 25.0 bits (52), Expect = 7.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 31 TDAALGAAAPIKTEHSYSL 49
TDAALG+++P++ E SL
Sbjct: 116 TDAALGSSSPVEHERKKSL 134
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 25.0 bits (52), Expect = 7.6
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 14 LIERDSKSGVVLHDRLMTDAALGAAAPIKTEHSYSLHSDVESAPPSPHHTKVDAIFMSA 72
L+++ ++ G L R + A + AAA T H+ S + +APP P + V + + A
Sbjct: 343 LLQKAAQMGATL-SRPSSHAHMAAAAAAST-HNSSSSAATTNAPPPPPTSNVSSTCVGA 399
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,563,733
Number of Sequences: 37544
Number of extensions: 89597
Number of successful extensions: 300
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 282
Number of HSP's gapped (non-prelim): 22
length of query: 83
length of database: 14,793,348
effective HSP length: 62
effective length of query: 21
effective length of database: 12,465,620
effective search space: 261778020
effective search space used: 261778020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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