BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000873-TA|BGIBMGA000873-PA|undefined (83 letters) Database: bee 429 sequences; 140,377 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 23 0.51 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 19 8.3 >AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. Length = 238 Score = 23.0 bits (47), Expect = 0.51 Identities = 10/24 (41%), Positives = 12/24 (50%) Query: 44 EHSYSLHSDVESAPPSPHHTKVDA 67 E S+S H V SPHH D+ Sbjct: 207 ERSFSEHDSVMLGEISPHHEYYDS 230 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 19.0 bits (37), Expect = 8.3 Identities = 5/17 (29%), Positives = 13/17 (76%) Query: 65 VDAIFMSAPYIQIGIKL 81 + +F++ YI+IG+++ Sbjct: 216 IPMVFIAVLYIRIGLRI 232 Database: bee Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 140,377 Number of sequences in database: 429 Lambda K H 0.317 0.132 0.387 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,509 Number of Sequences: 429 Number of extensions: 915 Number of successful extensions: 2 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2 length of query: 83 length of database: 140,377 effective HSP length: 47 effective length of query: 36 effective length of database: 120,214 effective search space: 4327704 effective search space used: 4327704 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 37 (19.8 bits) S2: 37 (19.0 bits)
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