GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000872-TA|BGIBMGA000872-PA|IPR002290|Serine/threonine
protein kinase, IPR001245|Tyrosine protein kinase,
IPR000195|RabGAP/TBC, IPR000719|Protein kinase, IPR011009|Protein
kinase-like
         (766 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    54   3e-09
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   1.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   2.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 54.4 bits (125), Expect = 3e-09
 Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)

Query: 87  LSTEEIINVARQVANGLQYLHANNITHRTLSDDNILIDLNGKVKLFNYGIFYMTYGGSEV 146
           +  + ++++ARQVA G+++L    + HR L+  N+L+  N  VK+ ++G+    Y  +  
Sbjct: 589 IQPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVY 648

Query: 147 AFPLG---QPRYLSPETILNSGGPT-ADIWTFGVILLELCIGKLWAKLKPGPILRRILGL 202
               G     R+++ E++ +    T +D+W+FGV+L E  I  L      G     +L  
Sbjct: 649 CKNGGGKLPVRWMALESLTHQRYTTYSDVWSFGVLLWE--IVTLGGTPYVGVHSSELLDF 706

Query: 203 VHVNDPAKRIAREHNSIEEYEQLPKYLQTLIEKCLQICPSKRATITEILQDLSNV 257
           +       R+AR  N   +       L  ++  C + CP  R T TE+ + L  +
Sbjct: 707 L---KSGNRLARPANCSPD-------LYAVMLNCWKECPKNRPTFTELSKSLEGL 751


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/61 (21%), Positives = 28/61 (45%)

Query: 485 VYWQGLDSLTAPFMYLNFCNEARAFACLSAFVPKFLHKFFLKDNSAVIKEYLAKFWQMAA 544
           ++W  +++ T  F+    CNE +    +S  + K      ++D  + IK+   +F+    
Sbjct: 265 IFWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDEIQDLISTIKDNFPRFYAARF 324

Query: 545 F 545
           F
Sbjct: 325 F 325


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/61 (21%), Positives = 28/61 (45%)

Query: 485 VYWQGLDSLTAPFMYLNFCNEARAFACLSAFVPKFLHKFFLKDNSAVIKEYLAKFWQMAA 544
           ++W  +++ T  F+    CNE +    +S  + K      ++D  + IK+   +F+    
Sbjct: 265 IFWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDEIQDLISTIKDNFPRFYAARF 324

Query: 545 F 545
           F
Sbjct: 325 F 325


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 329 DRRIAKYSIELLQSRLSHVSAHDYYPLMHERKKQNDAVTLPKTIRERDTEYQFY 382
           ++   K+   LL  R S V  +D+  + +   K N   T   T  +++  Y FY
Sbjct: 131 EKSSTKHYAALLTERSSLVLRNDFRLMSNNLNKNNVVATGRFTFHKKNLYYSFY 184


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.324    0.140    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,875
Number of Sequences: 317
Number of extensions: 8652
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 7
length of query: 766
length of database: 114,650
effective HSP length: 62
effective length of query: 704
effective length of database: 94,996
effective search space: 66877184
effective search space used: 66877184
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 47 (23.0 bits)