Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000871-TA|BGIBMGA000871-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR008973|C2
calcium/lipid-binding region, CaLB
(493 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 33 0.090
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 32 0.16
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 29 1.1
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 28 2.6
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 28 3.4
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 27 5.9
SPAC16E8.17c |||succinate-CoA ligase alpha subunit|Schizosacchar... 27 5.9
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 7.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 7.9
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 27 7.9
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 27 7.9
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 27 7.9
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 33.1 bits (72), Expect = 0.090
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 252 VHLIEAHDLAGYEAGGFNDPYVRVSLLPEVDTRVRQTPVHRNEANPFFDQHFKFPVSHDE 311
VH+ A DL+ + G +D Y+ V + + T V + + NP ++++ PV D+
Sbjct: 473 VHINRAEDLSKQDVNGLSDAYITVG-FHKFGKPLYCTRVVKQDLNPIWNEYAFIPVFPDQ 531
Query: 312 L-SDKTLLLQV-----FSRNEVMGSAKVPL 335
+ + + + +++ FS ++V+G K+ L
Sbjct: 532 VKAGEKISIELWDSDRFSPDDVVGRTKIGL 561
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 32.3 bits (70), Expect = 0.16
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 35 SHNSTDSFGDDKSHGSPSEMLISKEQCRVQPLNSDTRAATSLPHARLTRTPSISSQSSLD 94
S NS+DS D S S SE S E +SD+ +++S + S + S
Sbjct: 273 SSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQ 332
Query: 95 SATSRATSHRGSS 107
S+T+ +S +S
Sbjct: 333 SSTNSTSSEESTS 345
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 35 SHNSTDSFGDDKSHGSPSEMLISKEQCRVQPLNSDTRAATSLPHARLTRTPSISSQSSLD 94
S +S+DS + S S S S + SD+ +++S + + + SS SS D
Sbjct: 129 SSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSD 188
Query: 95 SATSRATSHRGSS 107
S + ++ SS
Sbjct: 189 SESESSSEDSDSS 201
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 35 SHNSTDSFGDDKSHGSPSEMLISKEQCRVQPLNSDTRAATSLPHARLTRTPSISSQSSLD 94
S +S+DS + S S S S + SD+ +++S + + + SS SS D
Sbjct: 183 SSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSD 242
Query: 95 SATSRATSHRGSS 107
S + ++ SS
Sbjct: 243 SESESSSEDSDSS 255
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 250 LEVHLIEAHDLAGYEAGGFNDPYVRVSLLPEVDTRVRQTPVHRNEANPFFDQHFKFPV-- 307
+ +HL A++L G D Y R+ +T+ +T V + NPF+D++ PV
Sbjct: 706 IRIHLRSANNLHSKIPGKKCDSYARIM---SHNTKQFRTVVIASNVNPFWDEYMYAPVIT 762
Query: 308 SHDELSDKTLLLQVFSRNEVMGSAKVPLS 336
HD + + ++++G + +S
Sbjct: 763 KHDIFFLQVMNYNSSGEDKLIGQTPINIS 791
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 28.3 bits (60), Expect = 2.6
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 34 QSHNSTDS--FGDDKSHGSPSEMLISKEQCRVQPLNSDTRAATSLPHARLTRTPSISSQS 91
+S N T S G S +PS ++SK + + + P+ + RT S +
Sbjct: 452 KSRNLTKSEKTGKSNSQQAPSNHVLSKSNTVPNLVTGFPTRSDNPPNEKRRRTSSSENSR 511
Query: 92 SLDSATSRATSHRGSSPAIRTFAPDGRTLEAGGVNVPRSPSPL 134
+LD S + SH +S + +++E ++ +SPS L
Sbjct: 512 ALDIQLSASDSHSPNSKSTL------KSVEGSAFSMSKSPSVL 548
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 27.9 bits (59), Expect = 3.4
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 16/83 (19%)
Query: 72 AATSLPHARLTRTPSISSQSSLDSATSRATSHRGSSPAIRTFAPD---------GRTLEA 122
A T++PH P+I+S S S T R + G P +R AP G L
Sbjct: 554 APTAMPH------PNITSPSPSISVTQRPAVNVGPPPYVRPSAPSKLPDTRQSIGDPLPP 607
Query: 123 GGV-NVPRSPSPLRAASLDVRAA 144
G + NV PS +R++S + A+
Sbjct: 608 GAMANVSAGPSSVRSSSYNSTAS 630
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 67 NSDTRAATSLPHARLTRTPSISSQSSLDSATSRATSH 103
N+ T +A P A TR SISS SS+ +S + S+
Sbjct: 225 NASTSSAPINPRAPQTRRESISSTSSIHYCSSSSLSY 261
>SPAC16E8.17c |||succinate-CoA ligase alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 79 ARLTRTPSISSQSSLDSATSRATSHRGSSPA--IRTFAPDGRTLEAGGVNVPRSPSPL 134
+R T P +S + + R H G+ A T A LEA GV + RSP+ L
Sbjct: 261 SRSTPKPVVSFIAGATAPKGRRMGHAGAIVAGGKGTAAAKFEALEAAGVRISRSPATL 318
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 50 SPSEMLISKEQCRVQPLNSDTRAATSLPHARLTRTPSISSQSSLDSATSRATSHRGSSPA 109
S S L S + +S + ++S HA + + S+ + SS +S + SH S P+
Sbjct: 93 SSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPS 152
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 7.9
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 35 SHNSTDSFGDDKSHGSPSEMLISKEQCRVQPLNSDTRAATSLPHARLTRTPSISSQSSLD 94
S +S S S + S IS P +S + TS + + + ++SS SS
Sbjct: 322 SSSSMSSSSSFSSSPTSSSSTISSSSS--SPSSSSFSSTTSSSKSSSSFSSTVSSSSSTS 379
Query: 95 SATSRATSHRGSSPA 109
S+T ++S S PA
Sbjct: 380 SSTLTSSSSSSSRPA 394
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 39 TDSFGDDK-SHGSPSEMLISKEQCRVQPLNSDT-RAATSLPHARLTRTPSISSQSSLDSA 96
TD+F K S+ P E L++ E+C+ ++D+ +++ + L + P +S
Sbjct: 93 TDTFNVVKESNDKPKENLVTSEECKASFFSTDSVNKDSTIDYDALQKDPLTYVKSCRARF 152
Query: 97 TSRATSHRGSSPAIRTFA 114
S+ T S TF+
Sbjct: 153 VSKDTKSFSYSSLANTFS 170
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 26.6 bits (56), Expect = 7.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 67 NSDTRAATSLPHARLTRTPSISSQSSLDSATSRATS 102
N+ + S LTRTPSI+S+ S++S T R+ S
Sbjct: 209 NASIHSLGSSSRPTLTRTPSITSR-SVNSVTERSKS 243
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.6 bits (56), Expect = 7.9
Identities = 25/104 (24%), Positives = 42/104 (40%)
Query: 35 SHNSTDSFGDDKSHGSPSEMLISKEQCRVQPLNSDTRAATSLPHARLTRTPSISSQSSLD 94
S S+ S+ + + S S E P +S+ +TS A ++ + + SS+ S
Sbjct: 154 SSESSSSYPASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAG 213
Query: 95 SATSRATSHRGSSPAIRTFAPDGRTLEAGGVNVPRSPSPLRAAS 138
SATS + S A + GV+ P S ++S
Sbjct: 214 SATSYVPTSSSSIALSSVVASASVSAANKGVSTPAVSSAAASSS 257
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,738,299
Number of Sequences: 5004
Number of extensions: 59136
Number of successful extensions: 168
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 158
Number of HSP's gapped (non-prelim): 18
length of query: 493
length of database: 2,362,478
effective HSP length: 76
effective length of query: 417
effective length of database: 1,982,174
effective search space: 826566558
effective search space used: 826566558
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)
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