Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000869-TA|BGIBMGA000869-PA|undefined
         (67 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   0.36 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   0.36 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   0.63 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   1.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   1.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   1.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   1.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   1.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   1.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 0.36
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 3   LYAFVFDVILITNVMFLDLKH 23
           LY   FDVI+I+  + L L+H
Sbjct: 219 LYYLYFDVIVISTFLQLFLEH 239


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 0.36
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 3   LYAFVFDVILITNVMFLDLKH 23
           LY   FDVI+I+  + L L+H
Sbjct: 145 LYYLYFDVIVISTFLQLFLEH 165


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 0.63
 Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 21  LKHVVSYDSQSNRLDKLTHACPRGIQAAYIEFQSVLINSEFKFFE 65
           + H+V       R+D   H  P  ++A Y   ++  +N++  F +
Sbjct: 189 MNHLVDLGVAGFRVDAAKHMWPADLEAIYASLKN--LNTDHGFLD 231


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 1.4
 Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 21  LKHVVSYDSQSNRLDKLTHACPRGIQAAYIEFQSVLINSEFKFFE 65
           + H+V       R+D   H  P  ++A Y   ++  +N++  F +
Sbjct: 190 MNHLVDLGVAGFRVDAAKHMWPADLEAIYGSLKN--LNTDHGFLD 232


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 1.4
 Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 1/24 (4%)

Query: 20  DLKHVVSYDSQSNRLDKLTHACPR 43
           D++HV++YD   + +D+  H   R
Sbjct: 477 DVQHVINYDLPKS-IDEYVHRIGR 499


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 1.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 19  LDLKHVVSYDSQSN 32
           LD  HV+SYD + N
Sbjct: 206 LDAIHVMSYDLRGN 219


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 1.9
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 21  LKHVVSYDSQSNRLDKLTHACPRGIQAAY 49
           + H+V       R+D   H  P  ++A Y
Sbjct: 190 MNHLVDLGVAGFRVDAAKHMWPADLEAIY 218


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
          transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.2 bits (40), Expect = 1.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 42 PRGIQAAYIEFQSVLINSEFKF 63
          PR ++ AY   Q + +  EF F
Sbjct: 4  PRRLRTAYTNTQLLELEKEFHF 25


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.2 bits (40), Expect = 1.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 42  PRGIQAAYIEFQSVLINSEFKF 63
           PR ++ AY   Q + +  EF F
Sbjct: 135 PRRLRTAYTNTQLLELEKEFHF 156


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.332    0.143    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,734
Number of Sequences: 317
Number of extensions: 444
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 67
length of database: 114,650
effective HSP length: 44
effective length of query: 23
effective length of database: 100,702
effective search space:  2316146
effective search space used:  2316146
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.6 bits)
S2: 35 (18.2 bits)