Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000868-TA|BGIBMGA000868-PA|IPR001128|Cytochrome P450,
IPR002401|E-class P450, group I
         (146 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   113   7e-28
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    85   3e-19
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    73   9e-16
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   0.56 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   5.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     20   9.2  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  113 bits (272), Expect = 7e-28
 Identities = 60/148 (40%), Positives = 96/148 (64%), Gaps = 8/148 (5%)

Query: 1   MKVLELVIKESLRMYPSVPLIERLITKDAEV--GGLKLSKGTSVVLNIFQMHRNPEVFEK 58
           MK LE  + E+LRMYP VPLI R I  D ++  G   +  G +VV+  F++HR P ++  
Sbjct: 397 MKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVIGTFKLHRQPHIYPN 456

Query: 59  PLEFIPERF--DSLEHKNPFSWLAFSAGPRNCIGQKFAMMEMKVTLSTLVRNFKLVPVDI 116
           P  F P+ F  +   +++ ++++ FSAGPR+C+G+K+AM+++K+ LST++RNF+ V  D+
Sbjct: 457 PDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFR-VRSDV 515

Query: 117 ---EPILCADLILRSQNGVKVGFLPRTQ 141
              E  L AD+IL+  +G K+   PR Q
Sbjct: 516 KESEFRLQADIILKRADGFKIRLEPRKQ 543


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 85.0 bits (201), Expect = 3e-19
 Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 4/115 (3%)

Query: 1   MKVLELVIKESLRMYPSVPLIERLITKDAEVGGLKLS--KGTSVVLNIFQMHRNPEVFEK 58
           M+ L+ V KE+LRMYP   ++ R    D      K++  K   + +  F +HR+  ++  
Sbjct: 353 MEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAIYPN 412

Query: 59  PLEFIPERFD--SLEHKNPFSWLAFSAGPRNCIGQKFAMMEMKVTLSTLVRNFKL 111
           P  F PERFD  ++  ++P  +L F  GPRNCIG +FA+ + KV L T++RN K+
Sbjct: 413 PDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKV 467


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 73.3 bits (172), Expect = 9e-16
 Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 2/140 (1%)

Query: 2   KVLELVIKESLRMYPSVPLIERLITKDAEVGGLKLSKGTSVVLNIFQMHRNPEVFEKPLE 61
           K L   I ESLR+ P+   I R++ +  E+ G +L+ GT V+L+ +    N E F+   +
Sbjct: 379 KYLRACITESLRLIPTTTCIARILDEPIELSGYRLTAGTVVLLHTWIAGLNEENFKDAKK 438

Query: 62  FIPERFDS-LEHKNPFSWLAFSAGPRNCIGQKFAMMEMKVTLSTLVRNFKLVPVDIEPIL 120
           ++PER+ +     +P     F AG R C G++F  + +++ L+ ++R F+++ V+ E  L
Sbjct: 439 YLPERWTTPTTPHSPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEII-VEEELDL 497

Query: 121 CADLILRSQNGVKVGFLPRT 140
             + IL  +  V +GF  R+
Sbjct: 498 QFEFILAPKGPVSLGFRDRS 517


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 25  ITKDAEVGGLKLSKGTSVVLNIFQMHRNPEVFEKPLEFIPERFDSLEHKNPFSW 78
           I K+  VGG K  + T ++  +  ++   ++   PL   PER + +E   PF +
Sbjct: 492 IIKNNSVGGKK--EWTGLIGEL--VNERADMIVAPLTINPERAEFIEFSKPFKY 541


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 124 LILRSQNGVKVGFLPRTQSNSKT 146
           L+L   N + +GF+  T  N+KT
Sbjct: 17  LMLAPINALLLGFVQSTPDNNKT 39


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase
          protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 38 KGTSVVLNIFQMHRNPEVFEKPLEF 62
          K T + L + +  R  E FE  LEF
Sbjct: 64 KDTEIGLFLHEELRRTEAFEVDLEF 88


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.138    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,963
Number of Sequences: 429
Number of extensions: 1227
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 146
length of database: 140,377
effective HSP length: 52
effective length of query: 94
effective length of database: 118,069
effective search space: 11098486
effective search space used: 11098486
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)