Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000867-TA|BGIBMGA000867-PA|IPR005711|Ribosomal protein
S5, eukaryotic and archaeal form, IPR005324|Ribosomal protein S5,
C-terminal, IPR011070|Globular protein, non-globular alpha/beta
subunit, IPR000851|Ribosomal protein S5, IPR013810|Ribosomal protein
S5, N-terminal
(261 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 367 e-100
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 325 6e-88
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 282 5e-75
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 280 2e-74
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 266 3e-70
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 239 4e-62
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 233 4e-60
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 200 4e-50
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 180 2e-44
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 170 3e-41
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 162 7e-39
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 159 9e-38
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 156 5e-37
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 152 8e-36
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 151 2e-35
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 150 4e-35
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 4e-35
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 148 1e-34
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 143 5e-33
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 141 1e-32
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 138 1e-31
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 135 9e-31
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 133 5e-30
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 133 5e-30
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 132 1e-29
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 130 3e-29
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 4e-27
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 121 2e-26
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 117 3e-25
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 117 3e-25
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 2e-22
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 107 3e-22
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 100 4e-20
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 2e-15
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 84 3e-15
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 83 7e-15
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 83 7e-15
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 81 4e-14
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 80 5e-14
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 78 2e-13
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 75 1e-12
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 2e-12
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 75 2e-12
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 74 4e-12
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 73 1e-11
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 73 1e-11
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 71 2e-11
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 71 3e-11
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 70 5e-11
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 70 5e-11
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 69 9e-11
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 68 2e-10
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 68 3e-10
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 63 6e-09
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 63 8e-09
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 62 1e-08
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 61 3e-08
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 60 6e-08
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 60 6e-08
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 59 1e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 58 2e-07
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 58 2e-07
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 58 2e-07
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 7e-07
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 55 2e-06
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 55 2e-06
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 54 3e-06
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 53 6e-06
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 53 6e-06
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 53 6e-06
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 49 1e-04
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 49 1e-04
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 46 0.001
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 46 0.001
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q05FJ9 Cluster: 30S ribosomal protein S5; n=1; Candidat... 44 0.003
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 44 0.004
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 42 0.012
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 42 0.016
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.036
UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S riboso... 39 0.11
UniRef50_A7AR68 Cluster: Putative uncharacterized protein; n=1; ... 37 0.59
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 36 0.78
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.4
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.4
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 5.5
UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30; Bacteri... 33 5.5
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 7.3
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.3
UniRef50_Q5PN02 Cluster: Putative membrane protein; n=2; Salmone... 33 9.6
UniRef50_A7EC39 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 367 bits (903), Expect = e-100
Identities = 172/216 (79%), Positives = 183/216 (84%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TL
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATL 233
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
GNF LTPDLW++ TKSPY EF
Sbjct: 234 GNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 269
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 325 bits (799), Expect = 6e-88
Identities = 141/216 (65%), Positives = 179/216 (82%), Gaps = 1/216 (0%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TL
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTL 206
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
GNF LTP+LW + P ++P E+
Sbjct: 207 GNFVKAAFAAASLTYGILTPNLWAERPFGQTPIEEY 242
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 282 bits (692), Expect = 5e-75
Identities = 132/215 (61%), Positives = 160/215 (74%)
Query: 45 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 104
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 105 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 164
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 165 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 224
G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLG
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
Query: 225 NFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
N LTPDLW + K P EF
Sbjct: 225 NSVKATYEALKNSYGFLTPDLWAETRFAKPPAQEF 259
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 280 bits (687), Expect = 2e-74
Identities = 131/210 (62%), Positives = 159/210 (75%), Gaps = 1/210 (0%)
Query: 46 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 105
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 106 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 165
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 166 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 225
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
Query: 226 FXXXXXXXXXXXXXXLTPDLWRDIPLTKSP 255
LTP+LW + PL SP
Sbjct: 210 TLKAAFVAIGNTYGFLTPNLWAEQPLPVSP 239
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 266 bits (653), Expect = 3e-70
Identities = 125/166 (75%), Positives = 135/166 (81%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCY
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
Query: 214 TSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
TSAR T +LGNF LTPDLW++ TKSPY EF
Sbjct: 168 TSARDCTASLGNFAKATFDTISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 239 bits (586), Expect = 4e-62
Identities = 114/139 (82%), Positives = 121/139 (87%)
Query: 51 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 110
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 111 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 170
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 171 PCKVTGKCGSVTVRLIPAP 189
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 233 bits (569), Expect = 4e-60
Identities = 108/216 (50%), Positives = 142/216 (65%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTT 194
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
NF + PD W + P T +P EF
Sbjct: 195 ENFAKASIAALEATSSMILPDQWEEKPRTLNPLLEF 230
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 200 bits (487), Expect = 4e-50
Identities = 92/114 (80%), Positives = 100/114 (87%)
Query: 111 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 170
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 171 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 224
P KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T T G
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWG 174
Score = 33.5 bits (73), Expect = 5.5
Identities = 13/20 (65%), Positives = 17/20 (85%)
Query: 46 DQKEWVPVTKLGRLVREGKI 65
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 180 bits (439), Expect = 2e-44
Identities = 101/167 (60%), Positives = 119/167 (71%), Gaps = 11/167 (6%)
Query: 52 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 111
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 112 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 171
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 172 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 218
CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 170 bits (414), Expect = 3e-41
Identities = 101/215 (46%), Positives = 127/215 (59%), Gaps = 20/215 (9%)
Query: 47 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 106
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQT 100
Query: 107 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 166
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-E 152
Query: 167 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 226
PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGNF
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNF 210
Query: 227 XXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEFKV 261
L PDL ++ KS Y +V
Sbjct: 211 TKAIFDTISKTHSYLIPDLQKETVFAKSLYQNSRV 245
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 162 bits (394), Expect = 7e-39
Identities = 82/181 (45%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 48 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 107
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 108 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 165
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRRG W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 166 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 225
+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T N
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 226 F 226
F
Sbjct: 190 F 190
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 159 bits (385), Expect = 9e-38
Identities = 82/185 (44%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WG 161
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 162 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 221
G PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTR 188
Query: 222 TLGNF 226
T NF
Sbjct: 189 TTYNF 193
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 156 bits (379), Expect = 5e-37
Identities = 85/184 (46%), Positives = 115/184 (62%), Gaps = 7/184 (3%)
Query: 49 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 104
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 105 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGN 162
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++RG W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 163 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 222
+ +PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRT 193
Query: 223 LGNF 226
NF
Sbjct: 194 TVNF 197
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 152 bits (369), Expect = 8e-36
Identities = 76/181 (41%), Positives = 112/181 (61%), Gaps = 3/181 (1%)
Query: 48 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 107
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 108 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 165
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++RG W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 166 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 225
KPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVN 181
Query: 226 F 226
+
Sbjct: 182 Y 182
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 151 bits (365), Expect = 2e-35
Identities = 81/182 (44%), Positives = 116/182 (63%), Gaps = 3/182 (1%)
Query: 46 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 105
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 106 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 163
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
+ H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
Query: 224 GN 225
+
Sbjct: 221 NS 222
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 150 bits (363), Expect = 4e-35
Identities = 100/214 (46%), Positives = 120/214 (56%), Gaps = 22/214 (10%)
Query: 46 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 105
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 106 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 165
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 166 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 225
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL N
Sbjct: 160 SL-TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDN 216
Query: 226 FXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
F LTP+LW+ + KS Y EF
Sbjct: 217 FDKATFNAISNTYSYLTPNLWKGLVFAKSTYLEF 250
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 4e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGL 129
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 148 bits (359), Expect = 1e-34
Identities = 76/179 (42%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 50 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 109
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 110 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 167
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V RG W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 168 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 226
HTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T NF
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 143 bits (346), Expect = 5e-33
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 3/202 (1%)
Query: 50 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 109
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 110 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 167
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V RG W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 168 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFX 227
+++ K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVNLA 236
Query: 228 XXXXXXXXXXXXXLTPDLWRDI 249
TP R++
Sbjct: 237 KATFNALENAAQSRTPQHAREV 258
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 141 bits (342), Expect = 1e-32
Identities = 77/179 (43%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 46 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 105
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 106 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 163
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 222
+ H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 138 bits (334), Expect = 1e-31
Identities = 96/207 (46%), Positives = 119/207 (57%), Gaps = 19/207 (9%)
Query: 51 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 110
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 111 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 169
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 170 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 229
PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLGN
Sbjct: 108 YPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKA 163
Query: 230 XXXXXXXXXXXLTPDLWRDIPLTKSPY 256
TP+LW++ TKSPY
Sbjct: 164 TFDAVSKTSHS-TPNLWKEAVFTKSPY 189
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 135 bits (327), Expect = 9e-31
Identities = 79/163 (48%), Positives = 96/163 (58%), Gaps = 7/163 (4%)
Query: 85 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 144
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 145 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 204
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLL 114
Query: 205 QMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWR 247
+MA + D + ARG T L N LT D WR
Sbjct: 115 RMASIDDGDSLARGCTAILDN-VIKATYDISKTYVSLTSDFWR 156
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 133 bits (321), Expect = 5e-30
Identities = 62/179 (34%), Positives = 107/179 (59%)
Query: 68 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 127
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 128 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 187
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 188 APRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 246
AP+GTGIV++ +L+++G++DC+T + G T + N +TPD W
Sbjct: 204 APKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 133 bits (321), Expect = 5e-30
Identities = 69/170 (40%), Positives = 106/170 (62%), Gaps = 3/170 (1%)
Query: 59 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 118
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 119 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 176
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 177 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 226
+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+
Sbjct: 120 RSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 132 bits (318), Expect = 1e-29
Identities = 60/87 (68%), Positives = 64/87 (73%)
Query: 173 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 232
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFD 184
Query: 233 XXXXXXXXLTPDLWRDIPLTKSPYSEF 259
LTPDLW++ TKSPY EF
Sbjct: 185 AISKTYSYLTPDLWKETVFTKSPYQEF 211
Score = 124 bits (298), Expect = 3e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 104 KQTRAGQRTRFK 115
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 130 bits (315), Expect = 3e-29
Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 16/193 (8%)
Query: 48 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 102
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 103 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 154
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 155 VRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 212
V RG W G PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDV 183
Query: 213 YTSARGSTGTLGN 225
+ + G T T N
Sbjct: 184 WVRSFGKTKTKMN 196
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 4e-27
Identities = 59/96 (61%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
Query: 47 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 106
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 107 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 142
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 121 bits (292), Expect = 2e-26
Identities = 65/124 (52%), Positives = 77/124 (62%), Gaps = 9/124 (7%)
Query: 103 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 162
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGE---------T 51
Query: 163 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 222
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 223 LGNF 226
L NF
Sbjct: 112 LYNF 115
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 117 bits (282), Expect = 3e-25
Identities = 56/87 (64%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 173 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 232
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 233 XXXXXXXXLTPDLWRDIPLTKSPYSEF 259
LTPDLW++ TKSPY EF
Sbjct: 184 AISKIYSYLTPDLWKETVFTKSPYQEF 210
Score = 109 bits (263), Expect = 5e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 104 KQTRAGQRTRFK 115
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 117 bits (281), Expect = 3e-25
Identities = 79/167 (47%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 164 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 209
IG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 2e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Query: 64 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 123
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 124 NGHIG 128
NG+ G
Sbjct: 62 NGYAG 66
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 107 bits (257), Expect = 3e-22
Identities = 48/73 (65%), Positives = 51/73 (69%)
Query: 187 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLW 246
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF LTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 247 RDIPLTKSPYSEF 259
++ TKSPY EF
Sbjct: 61 KETVFTKSPYQEF 73
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 100 bits (239), Expect = 4e-20
Identities = 48/66 (72%), Positives = 50/66 (75%)
Query: 161 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 220
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 221 GTLGNF 226
+L F
Sbjct: 67 ASLDYF 72
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 60 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 119
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 120 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 152
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 52 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 111
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 112 TRFKAFVAIGDNNGHIGL 129
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 84.2 bits (199), Expect = 3e-15
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
Query: 91 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 150
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 151 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 210
+++ V++ K ++ V G+ G+ V L+PAP GTGI++ + ++++AG
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFT 160
Query: 211 DCYTSARGSTGTL 223
D YT +RG+ +
Sbjct: 161 DIYTKSRGANAPM 173
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 83.0 bits (196), Expect = 7e-15
Identities = 75/216 (34%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 50 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 109
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 110 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 166
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 167 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGT 222
P P ++ S+ LI AP T I+S VPK LL + A D SA G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 223 LGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSE 258
LG LTPDLW TK YSE
Sbjct: 200 LGRLAKTTFDAISKTYSCLTPDLWNK---TKPLYSE 232
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 83.0 bits (196), Expect = 7e-15
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
+ K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 214 TSARGS 219
T +GS
Sbjct: 123 TKIKGS 128
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 80.6 bits (190), Expect = 4e-14
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 89 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 148
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 149 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 208
K + + V I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAG 180
Query: 209 VQDCYTSARGSTGTLGN 225
Q+ G+ L N
Sbjct: 181 YQNARGKQLGTDNALNN 197
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 80.2 bits (189), Expect = 5e-14
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
++ V +G T+P ++ G+ GS V + PA GTG++S + +L++AGV D
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
Query: 212 CYTSARGS 219
T + GS
Sbjct: 124 ILTKSLGS 131
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+ V K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKD 190
Query: 212 CYTSARGSTGTL 223
Y+ G +L
Sbjct: 191 VYSKNLGKNTSL 202
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 93 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 152
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 153 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 212
+ + K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD
Sbjct: 91 VKINF--------KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDV 142
Query: 213 YTSARGST 220
T + GS+
Sbjct: 143 LTKSWGSS 150
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 64 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 123
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 124 NGHIGLGVKCSKEVATAIRGAIIL 147
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 74.5 bits (175), Expect = 2e-12
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 152
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 153 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+PV G T+P +V G+ + V L PA GTGI++ + ++++AG+Q+
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQN 126
Query: 212 CYTSARGSTGTL 223
T + GST L
Sbjct: 127 ILTKSLGSTNPL 138
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 73.7 bits (173), Expect = 4e-12
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 261
Query: 214 TSARGSTGTLGN 225
GS L N
Sbjct: 262 GKQLGSNNALNN 273
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 72.5 bits (170), Expect = 1e-11
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 7/141 (4%)
Query: 85 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 144
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 145 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 204
++ AK SV+ V + T+P +V K + ++PA GTG+++ + +L
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVL 618
Query: 205 QMAGVQDCYTSARGSTGTLGN 225
++AGVQ+ G L N
Sbjct: 619 ELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/132 (27%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
V + K +++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVL 180
Query: 214 TSARGSTGTLGN 225
+ GS L N
Sbjct: 181 AKSLGSKSPLNN 192
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 154 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
PV G T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ +
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITN 128
Query: 212 CYTSARGS 219
+ GS
Sbjct: 129 MLSKELGS 136
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 70.9 bits (166), Expect = 3e-11
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 87 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 146
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 147 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 206
AK +++ V + TVP +V G G+ V + PA GTG+++ + ++++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIEL 149
Query: 207 AGVQDCYTSARG 218
AG+ D Y + G
Sbjct: 150 AGIADVYAKSLG 161
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 70.1 bits (164), Expect = 5e-11
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 90 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 149
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 150 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAG 208
+ VR G T+P G+ G+ L PA +GTGIV+ + +L++ G
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVG 124
Query: 209 VQDCYTSARGS 219
+ D T GS
Sbjct: 125 INDVLTKTFGS 135
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 70.1 bits (164), Expect = 5e-11
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 152 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 209
V+ P+ G TVP V G G+ + ++PA RGTG+V+ K + ++AG
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGY 137
Query: 210 QDCYTSARGST 220
D T GST
Sbjct: 138 TDVLTKIIGST 148
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 69.3 bits (162), Expect = 9e-11
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 12/127 (9%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 151
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+ + +G ++ +V G+ G+ V L PAP+GTGI++ + ++++AG D
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSD 177
Query: 212 CYTSARG 218
YT G
Sbjct: 178 IYTKNLG 184
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 298
Query: 214 TSARGSTGTLGN 225
S L N
Sbjct: 299 GKQIRSKNALNN 310
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
V I K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVI 140
Query: 214 TSARGSTGTLGN 225
GS L N
Sbjct: 141 AKQLGSDNLLNN 152
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 63.3 bits (147), Expect = 6e-09
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 89 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 148
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 149 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 208
K + V R T+ V G + TV L PA GTG+++ + +++ AG
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAG 153
Query: 209 VQDCYTSARGS 219
+ D T + GS
Sbjct: 154 ITDVLTKSMGS 164
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 62.9 bits (146), Expect = 8e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
V IG T P V G+ + V L PA GTG+++ + +L+ AGV D
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDIL 155
Query: 214 TSARGSTGTL 223
+ GS +
Sbjct: 156 AKSLGSDNAI 165
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
V + K +++ G G V + PA GTG+++ + +L++AGV++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNIL 131
Query: 214 TSARGSTGTLGN 225
GS L N
Sbjct: 132 AKQLGSNNPLNN 143
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 154 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 213
V I TVP + K + V L PAP+G GI+++ + ++++AG D Y
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIY 203
Query: 214 TSARGS 219
T + GS
Sbjct: 204 TKSYGS 209
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 60.1 bits (139), Expect = 6e-08
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 89 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 148
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 149 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 206
K +++ P+R G + G+ G+ G+ V L AP GTGI++ + + +
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFES 166
Query: 207 AGVQDCYTSARGST 220
GV D T + G++
Sbjct: 167 LGVADVVTKSVGTS 180
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 60.1 bits (139), Expect = 6e-08
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+ V + PH +V G G+ V L PA GTG+++ + +L+ AGV +
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSN 127
Query: 212 CYTSARGS 219
T GS
Sbjct: 128 ILTKCLGS 135
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 93 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 152
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 153 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 212
+ V T+P +V K G V L PA GTG+++ + +L++AGV+D
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDV 127
Query: 213 YTSARGST 220
+ G++
Sbjct: 128 LAKSLGAS 135
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S
ribosomal protein S2; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S2 - Macaca
mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 79
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
Score = 35.1 bits (77), Expect = 1.8
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 241 LTPDLWRDIPLTKSPYSEF 259
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 58.4 bits (135), Expect = 2e-07
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 88 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 147
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 148 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 205
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++ + + +
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCE 126
Query: 206 MAGVQDCYTSARGS 219
G+ D T + G+
Sbjct: 127 ACGIHDILTKSYGT 140
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 58.4 bits (135), Expect = 2e-07
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 152 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 209
++ PV G T+P + G +V L PA GTG+ + + +L GV
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGV 125
Query: 210 QDCYTSARGST 220
D ++GS+
Sbjct: 126 TDVLAKSKGSS 136
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
++ V K T+P +V G V L PA GTG+++ + +L+ AGV++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKN 182
Query: 212 CYTSARGS 219
T + GS
Sbjct: 183 VLTKSMGS 190
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 57.2 bits (132), Expect = 4e-07
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 151
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+P+R G T+ V G+ G+ V L A GTGI++ + + + GV D
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHD 134
Query: 212 CYTSARGST 220
+ GS+
Sbjct: 135 VVAKSTGSS 143
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 7e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 50 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 87
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 55.2 bits (127), Expect = 2e-06
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 152 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 209
++ P+R G T+ K G+ + + PAP GTGIV+ +K +M GV
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 210 QDCYTSARGST 220
D + GS+
Sbjct: 122 SDIIAKSYGSS 132
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 55.2 bits (127), Expect = 2e-06
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
++ + G+ I PH V G + L PA GTGIV+ + +L+MAGV++
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVAGSRIRLILEMAGVKN 125
Query: 212 CYTSARGSTGTL 223
+ GS +
Sbjct: 126 IVAKSLGSNNPM 137
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
++ V N I T+ V G+ G+ V + PA GTGI++ + + ++ GV +
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHN 132
Query: 212 CYTSARGST 220
GST
Sbjct: 133 ILAKCLGST 141
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 53.2 bits (122), Expect = 6e-06
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 96 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 155
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 156 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 214
+R + HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKA 115
Query: 215 SARGS 219
GS
Sbjct: 116 KIHGS 120
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 114 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 173
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 174 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 217
+TG+ + + P P G P +L + G+ C R
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 53.2 bits (122), Expect = 6e-06
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 94 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 151
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+P+R G T+ V GK G+ + L AP+GTGI++ + + ++ G++D
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
Query: 212 CYTSARGST 220
+ G++
Sbjct: 124 IVAKSMGTS 132
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 191 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 226
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 49.2 bits (112), Expect = 1e-04
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 96 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 155
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 156 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 215
+ + T+ + K S V L A GTGI++ + + ++ GVQD
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 216 ARGST 220
+ GS+
Sbjct: 133 SIGSS 137
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 46.0 bits (104), Expect = 0.001
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 91 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 150
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 151 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 210
++ PV R Y + T+ V GK G+V ++L+ P G G+ + ++ + AG+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGLRCQHLIFEMCRAAGIH 366
Query: 211 D 211
D
Sbjct: 367 D 367
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 45.6 bits (103), Expect = 0.001
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 102 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 160
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 161 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
N+ T+ VT K V L+ P G G+ ++ + AG+ D
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGLRCPHRIFEMCRAAGIHD 452
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 44.4 bits (100), Expect = 0.003
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
++P+RR Y + T+ KV K V + P G G+ + ++ ++AG++D
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGLRISHRLFEICRLAGIKD 362
Query: 212 CYTS 215
S
Sbjct: 363 LSAS 366
>UniRef50_Q05FJ9 Cluster: 30S ribosomal protein S5; n=1; Candidatus
Carsonella ruddii PV|Rep: 30S ribosomal protein S5 -
Carsonella ruddii (strain PV)
Length = 139
Score = 44.4 bits (100), Expect = 0.003
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
+ +++KI V K + G+ + A +G+ +IGLG S+EV +I+ + + AK +
Sbjct: 1 MEKKLIKIHRVTKVVKGGRIFSYTATSIVGNRKKNIGLGRGKSREVLESIKKSYLKAKKN 60
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+L + + +P + K + V L PA G++++ K++L + GV
Sbjct: 61 ILKLN--------FSKNIIPYFLFAKHCATKVFLYPANDIIGLIASKYVKQVLNIIGVFS 112
Query: 212 CYTSARGSTGTL 223
++ GST +
Sbjct: 113 VFSKIHGSTNAI 124
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 102 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 161
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 162 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
N+ T+ +VT K VRL P G G+ + ++ + AG++D
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGLRVSHRIFEMCRAAGIRD 425
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 43.6 bits (98), Expect = 0.005
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 91 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 150
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 151 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 210
++ P+RR Y + T+ VT K V++ P G G+ + ++ + AG+Q
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQ 354
Query: 211 D 211
D
Sbjct: 355 D 355
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 42.3 bits (95), Expect = 0.012
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 93 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLS 151
N +L V+ QT G++ +F VA GD G +GLG K A+ A+ A S
Sbjct: 148 NTRLLLNRIVKSQTGKGKKMQFCVLVATGDGKGMLGLGEGKDPLSFPVALEKAMWKATRS 207
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+ V R + N+ T+ +V K +V + + AP G G+ P+ ++ M G+ D
Sbjct: 208 MKMVPR--YQNR-----TIYGEVYKKFHAVHLTMRSAPAGHGLRVNPIVSQMCSMVGITD 260
Query: 212 CYTSARGSTGTL 223
+ GS L
Sbjct: 261 MTCNVYGSRNPL 272
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 190 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDI 249
RG + + + KKLL +A +QDCY AR + LGN+ LT DLW +
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTEN 64
Query: 250 PLTK 253
TK
Sbjct: 65 VCTK 68
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 40.7 bits (91), Expect = 0.036
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Query: 91 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA-- 148
+L+ + + V T G+ A V G+ G +G G + A R A A
Sbjct: 189 NLHRHAIVLKRVVHMTTKGKDASMYALVIAGNGKGLVGYGEGKDTNASKAGRKAFNAAVK 248
Query: 149 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 208
L + + +G G++ TV ++ K G+ V L P P G G+ PV + + G
Sbjct: 249 NLDSVAIHKGSDGSR-----TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVG 303
Query: 209 VQDCYTSARGST 220
+ D S GST
Sbjct: 304 ITDLSASIYGST 315
>UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S ribosomal
protein S5; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 28S ribosomal protein S5 - Nasonia
vitripennis
Length = 405
Score = 39.1 bits (87), Expect = 0.11
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 109 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 168
G++ + +FV G+ NG G+ + S E TA+R A A ++ V + K H
Sbjct: 162 GRKRSYSSFVITGNKNGLCGIALGKSAEGRTALRLARNRAGFKLMHV-------PLYKNH 214
Query: 169 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 219
TV + GS + + P G G+V K ++ G++D + GS
Sbjct: 215 TVFHDFFTQFGSTKLFVTKKPEGYGLVCHRAIKCACEVIGIKDLHVKVEGS 265
>UniRef50_A7AR68 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 778
Score = 36.7 bits (81), Expect = 0.59
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 91 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 150
+L VL+ ++ T+ G+ + VA+GD G+ G GV +V TA A+ A
Sbjct: 520 NLRSCVLERRRMRTMTKEGRVYFLRIIVAVGDGRGYFGTGVGFGNDVGTARASAVQQA-- 577
Query: 151 SVLPVRRGYWGNKIGK-PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 209
+R Y+ + K P T P V G+ V + P G+GI + L+ + G+
Sbjct: 578 ----LRNMYFIDYDPKEPLTTP--VLGQEYGCRVYIKPRKMGSGIRTNRKYLPLVYLIGL 631
Query: 210 QDCYTSARG 218
+C + G
Sbjct: 632 DNCRVTFHG 640
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 36.3 bits (80), Expect = 0.78
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 92 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 151
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 152 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 211
+ PV R Y + T+ V GK +V V+L+ P G G+ + + + G+ D
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGLRCQKLIFDMAKAVGIHD 360
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 88 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 147
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 148 AKLSVL 153
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.4
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 87 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 141
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 5.5
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 66 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 123
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 124 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 153
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30;
Bacteria|Rep: Exodeoxyribonuclease III - Frankia sp.
(strain CcI3)
Length = 304
Score = 33.5 bits (73), Expect = 5.5
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 143 GAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKK 202
G IL++ ++ V RG G+ G P P + CG + + + P G I K
Sbjct: 74 GVAILSRDTLDDVARGLPGDP-GFPGPEPRAIAATCGGIRIWSLYVPNGRTIDDPHYAYK 132
Query: 203 LLQMAGVQDCYTSA--RGSTGTLGNF 226
L +A +++ A +G+ TLG+F
Sbjct: 133 LAWLAALREVVAEATTQGAVMTLGDF 158
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 115 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 165
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 96 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 144
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q5PN02 Cluster: Putative membrane protein; n=2;
Salmonella|Rep: Putative membrane protein - Salmonella
paratyphi-a
Length = 224
Score = 32.7 bits (71), Expect = 9.6
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 72 YLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV 131
Y S+ + E + F L P + ++P ++ T F+A+ N H+ G
Sbjct: 26 YCLSIDMAEANTVVFLLKPGTISLLFLLLPARRFRTRLLATLSSVFIALVFNQWHLVAG- 84
Query: 132 KCSKEVATAIRGAIILAKLSVLPVRRGYW 160
+KE+ ++ A +A L++ V++ W
Sbjct: 85 --NKELVLCMQAACFMAFLAMTSVKKSGW 111
>UniRef50_A7EC39 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 169
Score = 32.7 bits (71), Expect = 9.6
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 187 PAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGSTGTL 223
P+P TGIV+ AP P LL ++ + C TS+ S G L
Sbjct: 21 PSPSQTGIVALAPSPSSLLTLSAILQCPTSSPPSLGYL 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.320 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,653,572
Number of Sequences: 1657284
Number of extensions: 8908493
Number of successful extensions: 16641
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 16463
Number of HSP's gapped (non-prelim): 99
length of query: 261
length of database: 575,637,011
effective HSP length: 99
effective length of query: 162
effective length of database: 411,565,895
effective search space: 66673674990
effective search space used: 66673674990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 71 (32.7 bits)
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