Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000867-TA|BGIBMGA000867-PA|IPR005711|Ribosomal protein
S5, eukaryotic and archaeal form, IPR005324|Ribosomal protein S5,
C-terminal, IPR011070|Globular protein, non-globular alpha/beta
subunit, IPR000851|Ribosomal protein S5, IPR013810|Ribosomal protein
S5, N-terminal
(261 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 388 e-108
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 388 e-108
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 388 e-108
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 388 e-108
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 387 e-108
AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p pro... 32 0.69
AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-P... 32 0.69
AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-P... 32 0.69
AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-P... 32 0.69
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 2.8
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 388 bits (955), Expect = e-108
Identities = 181/216 (83%), Positives = 191/216 (88%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
GNF LTPDLW+++PL +PY +
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 388 bits (955), Expect = e-108
Identities = 181/216 (83%), Positives = 191/216 (88%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
GNF LTPDLW+++PL +PY +
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 388 bits (955), Expect = e-108
Identities = 181/216 (83%), Positives = 191/216 (88%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
GNF LTPDLW+++PL +PY +
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 388 bits (955), Expect = e-108
Identities = 181/216 (83%), Positives = 191/216 (88%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTL 216
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
GNF LTPDLW+++PL +PY +
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 387 bits (952), Expect = e-108
Identities = 180/216 (83%), Positives = 191/216 (88%)
Query: 44 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 103
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 104 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 163
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 164 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 223
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGSTGTL
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTL 216
Query: 224 GNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 259
GNF LTPDLW+++PL +PY +
Sbjct: 217 GNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AY071397-1|AAL49019.1| 407|Drosophila melanogaster RE47909p
protein.
Length = 407
Score = 32.3 bits (70), Expect = 0.69
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 109 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 168
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 169 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 220
T+ G + P G G+V + + ++ G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
>AE014296-3798|ABI31280.1| 407|Drosophila melanogaster CG40049-PC,
isoform C protein.
Length = 407
Score = 32.3 bits (70), Expect = 0.69
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 109 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 168
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 169 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 220
T+ G + P G G+V + + ++ G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
>AE014296-3797|EAA46075.1| 407|Drosophila melanogaster CG40049-PA,
isoform A protein.
Length = 407
Score = 32.3 bits (70), Expect = 0.69
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 109 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 168
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 169 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 220
T+ G + P G G+V + + ++ G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
>AE014296-3796|EAA46076.2| 916|Drosophila melanogaster CG40049-PB,
isoform B protein.
Length = 916
Score = 32.3 bits (70), Expect = 0.69
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 109 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 168
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 169 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 220
T+ G + P G G+V + + ++ G++D Y GST
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 293
Score = 32.3 bits (70), Expect = 0.69
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 109 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 168
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 466 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 518
Query: 169 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 220
T+ G + P G G+V + + ++ G++D Y GST
Sbjct: 519 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 570
Score = 32.3 bits (70), Expect = 0.69
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 109 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 168
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 743 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 795
Query: 169 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 220
T+ G + P G G+V + + ++ G++D Y GST
Sbjct: 796 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST 847
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 167 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 207
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,058,737
Number of Sequences: 52641
Number of extensions: 384775
Number of successful extensions: 752
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 739
Number of HSP's gapped (non-prelim): 12
length of query: 261
length of database: 24,830,863
effective HSP length: 84
effective length of query: 177
effective length of database: 20,409,019
effective search space: 3612396363
effective search space used: 3612396363
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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