Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000866-TA|BGIBMGA000866-PA|IPR000246|Peptidase T2,
asparaginase 2
(248 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0711 - 27468045-27468264,27468831-27468935,27469431-274694... 175 3e-44
04_04_1391 + 33195508-33195903,33197506-33197592,33197678-33198196 77 1e-14
03_05_1022 - 29756127-29756198,29756335-29756421,29756783-297569... 40 0.001
03_05_0219 - 22059388-22059729,22059838-22059999 35 0.071
04_04_1628 + 34874688-34874915,34875182-34875232,34875532-348756... 31 0.66
06_01_0560 - 3977456-3977527,3978069-3978182,3978264-3978335,397... 31 1.2
06_03_1269 + 28865236-28865819,28866124-28866754 30 1.5
03_05_0217 - 22056301-22056648 29 3.5
01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 29 3.5
11_03_0188 - 11338013-11338976,11339843-11340183 28 8.2
09_02_0615 - 11251869-11252832,11253699-11254039 28 8.2
06_03_0490 - 21375400-21376363,21377230-21377570 28 8.2
06_02_0143 - 12266120-12267083,12267950-12268290 28 8.2
06_02_0141 + 12259098-12259438,12260305-12261268 28 8.2
02_04_0118 + 19924184-19924524,19925391-19926354 28 8.2
>04_04_0711 -
27468045-27468264,27468831-27468935,27469431-27469489,
27469566-27470009,27470123-27470187,27470871-27471066,
27471429-27471590
Length = 416
Score = 175 bits (426), Expect = 3e-44
Identities = 111/273 (40%), Positives = 145/273 (53%), Gaps = 28/273 (10%)
Query: 1 MNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGF---QEESLTTSVSK- 56
M IGAV +R +K I A+ V+DHT+H+ LVGE AT FA+ MG + S S+ K
Sbjct: 144 MEIGAVAAMRYVKDGIRAAKLVMDHTEHTLLVGEKATSFAISMGLVGPADLSSPESIGKW 203
Query: 57 KLWMK-------WHN---EHHCQPNFWLNVSPDPT---------RNCGPYQKHEYS-HHL 96
+W + W N C P ++V + R G + + ++L
Sbjct: 204 TIWRQNHCQPNFWKNVVPAGSCGPYNAIDVPSGESKASAKRVLERTQGDICQGLFEPNNL 263
Query: 97 LK--KSHLN-VDRFNHDTIGMVAIDQHGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXX 153
L+ S L V+R NHDTI M ID+ G IAAGTSTNGA +KIPGR+GD PIPGS AY
Sbjct: 264 LEPMNSRLKIVNRHNHDTISMAVIDKMGRIAAGTSTNGATFKIPGRVGDGPIPGSSAYAD 323
Query: 154 XXXXXXXXXXXXXVMLRFLPSFLTVEEMRRGSSPTDAAKTAVARIASHYPDFMGAVVALK 213
+M+RFLP + VE MRRG P DAA A+ RIA YPDF+GAV A+
Sbjct: 324 DEVGACGATGDGDIMMRFLPCYQVVESMRRGMEPRDAAMDAILRIARKYPDFVGAVFAIN 383
Query: 214 NDGEYGAACHGINMFPYVVYDKKHSSYQIVNVS 246
G + ACHG F Y V + +++ VS
Sbjct: 384 KKGVHAGACHGWT-FQYSVRNSSMQDVEVITVS 415
>04_04_1391 + 33195508-33195903,33197506-33197592,33197678-33198196
Length = 333
Score = 77.0 bits (181), Expect = 1e-14
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 4 GAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQ--EESLTTSVSKKLWMK 61
GAV G+ +K+ +S+AR V+D + HS+L + A QFA + G + + S + +K
Sbjct: 93 GAVSGVSTVKNPVSLARLVMDKSPHSYLAFDGAEQFARDQGLEVVDNSYFITEDNVGMLK 152
Query: 62 WHNEHHCQPNFWLNVSPDPTRNCGPYQ-KHEYSH-HLLKKSHLNVDRFNHDTIGMVAIDQ 119
E + F + + CG + SH + + + L + + +T+G +D
Sbjct: 153 LAKEAN-SILFDYRIPLSGSETCGAQAVSSDNSHGNGMVMNGLPISIYAPETVGCAVVDS 211
Query: 120 HGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFLPSFLTVE 179
G AA TST G K+ GRIGDSP+ GSG Y ++ L +
Sbjct: 212 SGHTAAATSTGGLMNKMTGRIGDSPLIGSGTYACGACAVSCTGEGEAIIRSTLARDVAAV 271
Query: 180 EMRRGSSPTDAAKTAVARIASHYPDFMGAVVALKNDGE--YGAACHGI 225
RG+ +A V + + ++A+ + GE YG C G+
Sbjct: 272 MEYRGAGLQEAVDYCVKK---RLDEGFAGLIAVSSTGEVAYGFNCTGM 316
>03_05_1022 -
29756127-29756198,29756335-29756421,29756783-29756968,
29757088-29757188,29757379-29757484,29757564-29757638,
29757772-29757903,29771476-29771655,29772032-29772234,
29773296-29773602
Length = 482
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 78 PDPTRNCGPYQKHEYSHHLLKKSHLNVDRFNHDTIGMVAIDQHGDIAAGTSTNGAKY 134
P P + G + KHEY ++++ + N F H+ +G + ++ ++ + NG +Y
Sbjct: 60 PAPDDDPGNFDKHEYRRRMIRQGNYNRKSFGHEILGAINLEYTSELISEMERNGGEY 116
>03_05_0219 - 22059388-22059729,22059838-22059999
Length = 167
Score = 34.7 bits (76), Expect = 0.071
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 1 MNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVE 42
+ GAV GL + +A+S+AR V++ T H +L + A FA E
Sbjct: 90 LRCGAVSGLSTVVNAVSLARLVMEKTPHIYLAFDGAEAFARE 131
>04_04_1628 +
34874688-34874915,34875182-34875232,34875532-34875652,
34875739-34875788,34876395-34876524,34877007-34877170,
34877262-34877300,34877301-34877464,34877808-34877931,
34878002-34878103,34878208-34878297
Length = 420
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 110 DTIGMVAIDQHGDIAAGTSTNGAKYK 135
DT+G V +D +G+IA+G S+ G K
Sbjct: 223 DTVGAVCVDAYGNIASGASSGGIALK 248
>06_01_0560 -
3977456-3977527,3978069-3978182,3978264-3978335,
3978428-3978497,3978608-3978705,3978791-3978992,
3979074-3979141,3979960-3980358
Length = 364
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 184 GSSPTDAAKTAVARIASHYPDFMGAVVALKNDGEYGAACHGI-NMFPYVVYDKKHSSYQI 242
G+SP A K ++ARIA P +M +A+K D E A + M+ Y V H I
Sbjct: 215 GNSPVIARKESLARIA---PTWMNISIAMKKDPETDKAFGWVLEMYAYAVASALHGVGNI 271
Query: 243 VN 244
++
Sbjct: 272 LH 273
>06_03_1269 + 28865236-28865819,28866124-28866754
Length = 404
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 174 SFLTVEEMRRGSS---PTDAAKTAVARIASHYPDFMGAVVALKNDGEYGAACHG 224
+FL E RR S P + + A++R HY G VVA +D +C G
Sbjct: 44 AFLVFERRRRRSRVHRPAETVRRALSRALVHYYPLAGHVVAAGDDDNVVLSCTG 97
>03_05_0217 - 22056301-22056648
Length = 115
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 138 GRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFLPSFLTVEEMRRGSSPTD-AAKTAVA 196
GRIGD+P+ G+G Y ++ + V + + P + A A
Sbjct: 3 GRIGDTPVIGAGTYANALCAVSATGVGEAIIRHTVAR--DVAALLEHAPPAGLSLGDAAA 60
Query: 197 RIASHYPDFMGAVVALKNDGEYGAACHGINMF 228
R+ + P +VA+ GE A + MF
Sbjct: 61 RVVAGVPPGKVGLVAVSAAGEVAMAYNTTGMF 92
>01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872
Length = 686
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 63 HNEHHCQPNFWLNVSPDPTRNCGPYQKHEYSHHLLKKSHLNVDRFNHDTIGMVAIDQHGD 122
H +HH Q ++ P P QK + + HL + S+ V+R + +GD
Sbjct: 353 HKKHHGQQPPVQELTTPPKAE--PSQKKQRAQHLKRYSYSEVERMTKTFAHKIGQGNYGD 410
Query: 123 IAAGTSTNG 131
+ G +G
Sbjct: 411 VYKGNLRDG 419
>11_03_0188 - 11338013-11338976,11339843-11340183
Length = 434
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 34 ELATQFAVEMGFQEESLTTSVSKKLWMKW--HNEHHCQPNFWLNVSPDP 80
+ A V++ E+++ + +KK +++ H+E + WLN S DP
Sbjct: 157 QAAANNTVQIDIHEDAINDASAKKRSLRYWTHDEEERLASAWLNASKDP 205
>09_02_0615 - 11251869-11252832,11253699-11254039
Length = 434
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 34 ELATQFAVEMGFQEESLTTSVSKKLWMKW--HNEHHCQPNFWLNVSPDP 80
+ A V++ E+++ + +KK +++ H+E + WLN S DP
Sbjct: 157 QAAANNTVQIDIHEDAINDASAKKRSLRYWTHDEEERLASAWLNASKDP 205
>06_03_0490 - 21375400-21376363,21377230-21377570
Length = 434
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 34 ELATQFAVEMGFQEESLTTSVSKKLWMKW--HNEHHCQPNFWLNVSPDP 80
+ A V++ E+++ + +KK +++ H+E + WLN S DP
Sbjct: 157 QAAANNTVQIDIHEDAINDASAKKRSLRYWTHDEEERLASAWLNASKDP 205
>06_02_0143 - 12266120-12267083,12267950-12268290
Length = 434
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 34 ELATQFAVEMGFQEESLTTSVSKKLWMKW--HNEHHCQPNFWLNVSPDP 80
+ A V++ E+++ + +KK +++ H+E + WLN S DP
Sbjct: 157 QAAANNTVQIDIHEDAINDASAKKRSLRYWTHDEEERLASAWLNASKDP 205
>06_02_0141 + 12259098-12259438,12260305-12261268
Length = 434
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 34 ELATQFAVEMGFQEESLTTSVSKKLWMKW--HNEHHCQPNFWLNVSPDP 80
+ A V++ E+++ + +KK +++ H+E + WLN S DP
Sbjct: 157 QAAANNTVQIDIHEDAINDASAKKRSLRYWTHDEEERLASAWLNASKDP 205
>02_04_0118 + 19924184-19924524,19925391-19926354
Length = 434
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 34 ELATQFAVEMGFQEESLTTSVSKKLWMKW--HNEHHCQPNFWLNVSPDP 80
+ A V++ E+++ + +KK +++ H+E + WLN S DP
Sbjct: 157 QAAANNTVQIDIHEDAINDASAKKRSLRYWTHDEEERLASAWLNASKDP 205
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.134 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,426,852
Number of Sequences: 37544
Number of extensions: 295621
Number of successful extensions: 602
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 592
Number of HSP's gapped (non-prelim): 17
length of query: 248
length of database: 14,793,348
effective HSP length: 80
effective length of query: 168
effective length of database: 11,789,828
effective search space: 1980691104
effective search space used: 1980691104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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