GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000866-TA|BGIBMGA000866-PA|IPR000246|Peptidase T2,
asparaginase 2
         (248 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28509| Best HMM Match : Asparaginase_2 (HMM E-Value=1.6e-10)       122   2e-28
SB_33572| Best HMM Match : Asparaginase_2 (HMM E-Value=0)              93   2e-19
SB_1777| Best HMM Match : Asparaginase_2 (HMM E-Value=1e-13)           87   2e-17
SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.)              83   2e-16
SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32)        77   1e-14
SB_35228| Best HMM Match : Asparaginase_2 (HMM E-Value=8.7e-10)        70   2e-12
SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)        62   6e-10
SB_35229| Best HMM Match : Asparaginase_2 (HMM E-Value=3.2e-05)        42   6e-04
SB_8928| Best HMM Match : Ribosomal_L27 (HMM E-Value=5.5)              41   0.001
SB_11873| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.031
SB_5160| Best HMM Match : Phospholip_A2_1 (HMM E-Value=3.1e-07)        32   0.51 
SB_10793| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.89 

>SB_28509| Best HMM Match : Asparaginase_2 (HMM E-Value=1.6e-10)
          Length = 198

 Score =  122 bits (295), Expect = 2e-28
 Identities = 55/106 (51%), Positives = 71/106 (66%)

Query: 113 GMVAIDQHGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFL 172
           GMVAID  G I+AG STNG  +KI GR+GDSP+PG+GAY               VM+RFL
Sbjct: 41  GMVAIDSKGHISAGASTNGLAFKIKGRVGDSPMPGAGAYADNEAGAAAATGDGDVMMRFL 100

Query: 173 PSFLTVEEMRRGSSPTDAAKTAVARIASHYPDFMGAVVALKNDGEY 218
           P++  VE MR+G SPT+AAK ++ARI  +YP+F GA+V +   G Y
Sbjct: 101 PTYQAVEYMRQGKSPTEAAKLSLARIVKYYPEFFGALVVVNTTGHY 146


>SB_33572| Best HMM Match : Asparaginase_2 (HMM E-Value=0)
          Length = 427

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 6/227 (2%)

Query: 1   MNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQEESLTTSVSKKLWM 60
           ++ GAV  ++ + + +S+ARHV+  T H  LV E A +FA ++G       +  ++  + 
Sbjct: 136 LDTGAVACVKGVVNPVSLARHVMTDTPHCMLVSEGAIKFAQDLGLPMVEPQSMANE--FS 193

Query: 61  KWHNEHHCQPNFWLNVSPDPTRNCGPYQKHEYSHHLLKKSHLNVDRFNHDTIGMVAIDQH 120
           ++      +PN         T N     + E       + HL+     HDT+G VA+D H
Sbjct: 194 RFKASLLDKPNTSFEDFLRMTMNTE--SRTEKCSLSSVQEHLSKSLTEHDTVGAVAMDCH 251

Query: 121 GDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFLPSFLTVEE 180
           G+IA  TST G   K+ GR+GDSP+PGSG Y               +M + + +   V  
Sbjct: 252 GNIACATSTGGLFKKMCGRVGDSPMPGSGGYACKEGGASTTGHGESIM-KVVLAREVVYH 310

Query: 181 MRRGSSPTDAAKTAVARIASHYPDFMGAVVALKNDGEYGAACHGINM 227
           +  G S  DA    + ++ +      G V+++   G YG A   + M
Sbjct: 311 LENGKSVNDACANGINKMFT-LTGGQGGVISIDKHGNYGKAFSTLGM 356


>SB_1777| Best HMM Match : Asparaginase_2 (HMM E-Value=1e-13)
          Length = 250

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 12/226 (5%)

Query: 5   AVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGF---QEESLTTSVSKKLWMK 61
           AV  ++ + + +S+ARHV+  T H  LV E A +FA ++     + +S+T+  S+     
Sbjct: 2   AVACVKGVVNPVSLARHVMTDTPHCMLVSEGAVKFAQDLDLPMVEPQSMTSEFSRFKASL 61

Query: 62  WHNEHHCQPNFWLNVSPDPTRNCGPYQKHEYSHHLLKKSHLNVDRFNHDTIGMVAIDQHG 121
            +N     PN     +   T N    Q  + S   +++  L+     HDT+G VA+D HG
Sbjct: 62  RNN-----PNATFEDALRMTVNTES-QTEKCSLSSVQE-RLSKSLPEHDTVGAVAMDCHG 114

Query: 122 DIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFLPSFLTVEEM 181
           +IA  TST G   K+ GR+GDSP+PGSG Y               + ++ + +   + ++
Sbjct: 115 NIACATSTGGLFKKMCGRVGDSPMPGSGGYASKEGGASTTGHGESI-IKVVLAREVIYQL 173

Query: 182 RRGSSPTDAAKTAVARIASHYPDFMGAVVALKNDGEYGAACHGINM 227
             G S  DA    + ++ +      G V+++   G YG A   + M
Sbjct: 174 EDGKSVNDACTNGINKMFT-LTGGQGGVISIDKHGNYGKAFSTLGM 218


>SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 597

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 62/226 (27%), Positives = 93/226 (41%), Gaps = 7/226 (3%)

Query: 1   MNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMGFQE---ESLTTSVSKK 57
           +N+G VGG+  + + ISVAR V+  + H  L+GE A  FA E G      E+L T   ++
Sbjct: 286 LNVGGVGGISGVSNPISVARKVMTESNHCLLIGEGANMFADEQGIPRIPPEALITEARRR 345

Query: 58  LWMKWHNEHHCQPNFWLNVSPDPTRNCGPYQKHEYSHHLLKKSHLNVDRFN--HDTIGMV 115
              +                       GP      S    KK  L  +        +G V
Sbjct: 346 QLARAMEAMEIIDMSDDESDSSDEPEAGPKSPKSPSKQE-KKKLLRQESIAGLKKVVGAV 404

Query: 116 AIDQHGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFLPSF 175
           A+D  G++A  TST G     PGR+GDSPI G G Y               +++R   + 
Sbjct: 405 AVDSFGNVACATSTGGLTAVHPGRVGDSPIVGCGGYADNQVAAASSTGTGEMIMRVNLAR 464

Query: 176 LTVEEMRRGSSPTDAAKTAVARIASHYPDFMGAVVALKNDGEYGAA 221
             +  ++ G +  DAA  A+  +        G ++ +  DGE G A
Sbjct: 465 YALFMIQIGQTAADAAAAALRYMEQRVGGRAG-IIIVSRDGEAGIA 509


>SB_38156| Best HMM Match : Asparaginase_2 (HMM E-Value=1.5e-32)
          Length = 373

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 34/62 (54%), Positives = 42/62 (67%)

Query: 113 GMVAIDQHGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFL 172
           GMV +D +G++A GTSTNGA +K+PGR+GDSPI GSGAY               VM+RFL
Sbjct: 166 GMVVVDANGNMAGGTSTNGASHKVPGRVGDSPIAGSGAYVDNEVGGAAATGDGDVMMRFL 225

Query: 173 PS 174
           PS
Sbjct: 226 PS 227



 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 20/33 (60%), Positives = 29/33 (87%)

Query: 2   NIGAVGGLRRIKHAISVARHVLDHTKHSFLVGE 34
           ++GAVG L+R+K+AI VAR V++H+K +FLVGE
Sbjct: 132 DVGAVGCLKRVKNAIGVARSVMEHSKETFLVGE 164



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 194 AVARIASHYPD-FMGAVVALKNDGEYGAACHGINMFPYVV 232
           A+ RI   Y D F G+V+A+   GEYGAA +    F Y V
Sbjct: 2   ALMRIHKIYKDGFTGSVIAVNKKGEYGAASYKWTSFKYSV 41


>SB_35228| Best HMM Match : Asparaginase_2 (HMM E-Value=8.7e-10)
          Length = 421

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 103 NVDRFNHDTIGMVAIDQHGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXX 162
           N+D   HDT+G VAID+ G++A GTST G     PGR+GDSPI G G Y           
Sbjct: 211 NIDE--HDTVGAVAIDEFGNVACGTSTGGISGVHPGRVGDSPIIGCGGYADNEIAAISTT 268

Query: 163 XXXXVMLRFLPSFLTVEEMRRGSSPTDAAKTAVARIASHYPDFMGAVVALKNDGEYGAAC 222
                +LR   +  ++  M+ G +PT++   A+  +        G ++ L  +G   A  
Sbjct: 269 GSGEFLLRCTLASHSMYMMQSGKTPTESVFAALDNMDKRIGG-KGGMIVLDCEGN-AAIA 326

Query: 223 HGINMFPY 230
           H     P+
Sbjct: 327 HSTPHMPW 334



 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 2/119 (1%)

Query: 112 IGMVAIDQHGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRF 171
           +G VAID+ G++A GTST G      GR+GDSPI G G Y                +LR 
Sbjct: 55  VGAVAIDEFGNVACGTSTGGMTGVYHGRVGDSPIIGCGGYADNEIAAISTTGSGEFILRC 114

Query: 172 LPSFLTVEEMRRGSSPTDAAKTAVARIASHYPDFMGAVVALKNDGEYGAACHGINMFPY 230
             +  ++  M+ G +PT++   A+  +        G ++ L  +G   A  H     P+
Sbjct: 115 TLASHSMYMMQSGKTPTESVFAALDNMDKRIGG-KGGMIVLDCEGN-AAIAHSTPHMPW 171


>SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)
          Length = 423

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 103 NVDRFNHDTIGMVAIDQHGDIAAGTSTNGAKYKIPGRIGDSPIPGSGAYXXXXXXXXXXX 162
           N+D   HDT+G VAID+ G++A GTST G     PGR+GDSPI G G Y           
Sbjct: 274 NIDE--HDTVGAVAIDEFGNVACGTSTGGISGVHPGRVGDSPIIGCGGYADNEIAAISTT 331

Query: 163 XXXXVMLR 170
                +LR
Sbjct: 332 GSGEFILR 339



 Score = 41.1 bits (92), Expect = 8e-04
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)

Query: 1   MNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMG---FQEESLTTSVSKK 57
           ++ G V GLR + + I+VA+ ++ +++H  L GE    FA EMG     +E+L T + +K
Sbjct: 141 IDYGGVCGLRNVANPITVAKKLMTNSRHCLLTGEGGDMFAREMGVPFVSDENLITEMRRK 200


>SB_35229| Best HMM Match : Asparaginase_2 (HMM E-Value=3.2e-05)
          Length = 477

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)

Query: 1   MNIGAVGGLRRIKHAISVARHVLDHTKHSFLVGELATQFAVEMG---FQEESLTTSVSKK 57
           ++ G V GLR + + I+VA+ ++ +++H  L GE    FA EMG     +E+L T + +K
Sbjct: 326 IDYGGVCGLRNVANPITVAKKLMTNSRHCLLTGEGGDMFAQEMGVPFVSDENLITEMRRK 385


>SB_8928| Best HMM Match : Ribosomal_L27 (HMM E-Value=5.5)
          Length = 121

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 138 GRIGDSPIPGSGAYXXXXXXXXXXXXXXXVMLRFLPSFLTVEEMRRGSSPTDAAKTAVAR 197
           GR+GDSP+PGSG Y               +M + + +   V  +  G +  DA    + +
Sbjct: 3   GRVGDSPMPGSGGYACKEGGASTTGHGESIM-KVVLAREVVYHLENGKNVNDACANGINK 61

Query: 198 IASHYPDFMGAVVALKNDGEYGAACHGINM 227
           + +      G V+++   G YG A   + M
Sbjct: 62  MFT-LTGGQGGVISIDKHGNYGKAFSTLGM 90


>SB_11873| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 35.9 bits (79), Expect = 0.031
 Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 17 SVARHVLDHTKHSFLVGELATQFAVEMGFQ---EESLTTSVSKKLWMK 61
          SVAR VL+ + HS LVG  A  FA + G +   EESL T  SK  + K
Sbjct: 7  SVARLVLERSPHSMLVGSGAHTFAEQNGVKIESEESLQTQESKDAYKK 54


>SB_5160| Best HMM Match : Phospholip_A2_1 (HMM E-Value=3.1e-07)
          Length = 219

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 201 HYPDFMGAVVALKNDGEYG--AACHGINMFPYVVYDKKHSSYQIV 243
           +YPD +G+ +   +D +    A C G+ +F + +Y+ KH + + V
Sbjct: 89  YYPDLIGSYIRCHDDIKEAVTAQCEGLGLFLFDIYNNKHKNTEEV 133


>SB_10793| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 435

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 44  GFQEESLTTSVSKKLWMKWHNEHHCQPNFWLNVSPDPTRNCGPYQKHEYSHHLLKKSHLN 103
           G+   S+       LW K H +HH  P +  N     T    P+ K    H+  + +  N
Sbjct: 229 GYTSNSMDQGTLPTLWTKVHIQHH-GPRYTCNTMDQGTHPT-PWTKVHIPHYGPRYTSNN 286

Query: 104 VDRFNHDT-IGMVAIDQHG 121
           +D+  H T    V I  HG
Sbjct: 287 MDQRTHPTPWTKVHIKHHG 305


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.320    0.134    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,323,315
Number of Sequences: 59808
Number of extensions: 326925
Number of successful extensions: 486
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 466
Number of HSP's gapped (non-prelim): 20
length of query: 248
length of database: 16,821,457
effective HSP length: 80
effective length of query: 168
effective length of database: 12,036,817
effective search space: 2022185256
effective search space used: 2022185256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)