GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000866-TA|BGIBMGA000866-PA|IPR000246|Peptidase T2,
asparaginase 2
         (248 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.0  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   8.0  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 45  FQEESLTTSVSKKLWMKWHNEHHCQPNF 72
           F++E+       K W KW++    Q N+
Sbjct: 682 FKDEAKDLVSVNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 45  FQEESLTTSVSKKLWMKWHNEHHCQPNF 72
           F++E+       K W KW++    Q N+
Sbjct: 682 FKDEAKDLVSVNKSWNKWNDWQETQNNY 709


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 45  FQEESLTTSVSKKLWMKWHNEHHCQPNF 72
           F++E+       K W KW++    Q N+
Sbjct: 682 FKDEAKDLVSVNKSWNKWNDWQETQNNY 709


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 77 SPDPTRNCGPYQKHEYSHH 95
          SP   R+   YQ H + HH
Sbjct: 60 SPPEHRDLPIYQSHHHLHH 78


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.134    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,529
Number of Sequences: 429
Number of extensions: 2736
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 248
length of database: 140,377
effective HSP length: 56
effective length of query: 192
effective length of database: 116,353
effective search space: 22339776
effective search space used: 22339776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)