Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000865-TA|BGIBMGA000865-PA|IPR007005|XAP5 protein
(339 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0082 + 20749425-20749589,20750137-20750238,20750320-207503... 216 2e-56
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 30 2.3
05_01_0299 - 2322204-2322734,2324089-2326164 30 3.1
04_04_1243 + 32029332-32029738,32031785-32032172 30 3.1
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 29 5.4
04_03_0554 - 17075142-17075159,17075788-17076591,17076619-170767... 29 5.4
>09_06_0082 +
20749425-20749589,20750137-20750238,20750320-20750384,
20750471-20750588,20750937-20751012,20751304-20751365,
20751457-20751588,20751686-20751739,20751969-20752034,
20752115-20752189,20752271-20752321
Length = 321
Score = 216 bits (528), Expect = 2e-56
Identities = 91/147 (61%), Positives = 118/147 (80%)
Query: 192 LKDEPITVTFSYWDGSGHRRNVTLKKGNSIYQFLQRCLDALRPEFSELKTISADQLMYVK 251
L DEP+T+T+SYWDG+GHRR + ++KG+SI +FL+ L PEF E++T S + L+YVK
Sbjct: 174 LTDEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVK 233
Query: 252 EDLILPHHYTFYDFIVTKARGKSGPLFQFDASDDVRLVNDATQEKQDSHAGKVLLRSWYE 311
EDLI+PH ++FY+ I+ KARGKSGPLF FD +DVR + DAT+EK +SHAGKV+ R WYE
Sbjct: 234 EDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVERHWYE 293
Query: 312 RNKHIFPASRWEPYDPTKTYSKYTIKG 338
+NKHIFPASRWE YDPTK + +YTI G
Sbjct: 294 KNKHIFPASRWEIYDPTKKWERYTIHG 320
Score = 29.1 bits (62), Expect = 5.4
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 4 YKGAASEAGRAMHLMKKREKAQQEIELRKKKIEED----LKIDNIENKFAT----HYD-- 53
Y G A +A + L K+RE +++IE K K + L+ + ++ T YD
Sbjct: 8 YVGTAQDAVKIRRLEKQREAERRKIEELKNKSSDGQPGLLQFGSSTSEKLTPNSMDYDFQ 67
Query: 54 AVEQQLKSSTIGLVTLDEMKAKQEHI 79
+E K T+GLVT ++ K+ +I
Sbjct: 68 ILETAFKKETVGLVTREQYVEKRVNI 93
>02_04_0028 +
19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 22 EKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIGLVTLDEMKAKQEHIV 80
+K ++E E K+K EE+ D+ E + +H + L+S G +++D M K+ I+
Sbjct: 234 QKEEEEKEKEKEKEEEEDDDDDEEGELLSHVSRRKNPLRSRIDGYISMD-MNGKRRAIL 291
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 18 MKKREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIGLVTL 69
++K+E+ Q E LR ++ LK +N ++ + A+EQQ+ + L +L
Sbjct: 711 LEKKERDQIETSLRSEENFLHLKAENDTQRYKSQIRALEQQISQLKVSLDSL 762
>04_04_1243 + 32029332-32029738,32031785-32032172
Length = 264
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 183 LEWVMTQASLKDEPITVTFSYWDGSGHRRNVTLKKGNSIYQFLQRCL 229
LE V A L+ E V ++Y D + HRR ++++ L CL
Sbjct: 80 LERVHRYAGLEPECYVVAYAYVDMAAHRRPAAAVASRNVHRLLLACL 126
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 9 SEAGRAMHLMKKREKAQQEIELRKKKIEE-DLKI 41
SE RA L KKR + QQ E ++KK+EE D+K+
Sbjct: 1531 SEKQRADDLEKKRSEEQQANEEKQKKMEETDVKM 1564
>04_03_0554 -
17075142-17075159,17075788-17076591,17076619-17076719,
17077095-17077751,17077827-17078768,17078837-17078896,
17079131-17079763,17079886-17079942,17080177-17080702
Length = 1265
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 15 MHLMKKREKAQQEIELRKKKIEEDLK-IDNIENKF-ATHYDAVEQQLKSSTIGLVTLDEM 72
M L +K EK ++ E K+ +DL + N+E ATH EQ++ S G + E
Sbjct: 231 MTLQEKEEKLKKRREAYKRN--KDLNALANVEEPLHATHSGQAEQEIASQDKGSIPKQEK 288
Query: 73 KA 74
KA
Sbjct: 289 KA 290
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,489,446
Number of Sequences: 37544
Number of extensions: 273696
Number of successful extensions: 864
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 855
Number of HSP's gapped (non-prelim): 8
length of query: 339
length of database: 14,793,348
effective HSP length: 82
effective length of query: 257
effective length of database: 11,714,740
effective search space: 3010688180
effective search space used: 3010688180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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