GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000865-TA|BGIBMGA000865-PA|IPR007005|XAP5 protein
         (339 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25773| Best HMM Match : 7tm_1 (HMM E-Value=1.68156e-44)            171   5e-43
SB_955| Best HMM Match : p450 (HMM E-Value=0)                          34   0.19 
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)                  31   1.3  
SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05)                 31   1.8  
SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4)                      30   2.3  
SB_40852| Best HMM Match : SURF6 (HMM E-Value=3.8)                     30   3.1  
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)                 30   3.1  
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.1  
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)          29   4.1  
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_44425| Best HMM Match : SAM_1 (HMM E-Value=0.00024)                 29   5.4  
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.2  
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)                  28   9.5  
SB_18395| Best HMM Match : Ubiq_cyt_C_chap (HMM E-Value=0.74)          28   9.5  
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)         28   9.5  
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)                   28   9.5  
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)               28   9.5  

>SB_25773| Best HMM Match : 7tm_1 (HMM E-Value=1.68156e-44)
          Length = 906

 Score =  171 bits (417), Expect = 5e-43
 Identities = 70/96 (72%), Positives = 84/96 (87%)

Query: 242 ISADQLMYVKEDLILPHHYTFYDFIVTKARGKSGPLFQFDASDDVRLVNDATQEKQDSHA 301
           ++ + LMYVKEDLI+PHH+TFYDFI+ KARGKSGPLF FD  +DVR++NDAT EK +SHA
Sbjct: 3   LTTENLMYVKEDLIIPHHHTFYDFIINKARGKSGPLFSFDVHEDVRMINDATVEKDESHA 62

Query: 302 GKVLLRSWYERNKHIFPASRWEPYDPTKTYSKYTIK 337
           GKV+LR WYERNKHIFPASRWEPYDP K + KYT++
Sbjct: 63  GKVVLRGWYERNKHIFPASRWEPYDPEKKWEKYTVR 98


>SB_955| Best HMM Match : p450 (HMM E-Value=0)
          Length = 514

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 2   AHYKGAASEAGRAMHLMKKREKAQQEIELRKKK-IEEDLKIDNIENKFATHYDAVEQQLK 60
           AHY  +       M L+K R +A+ E E  KK  + +D  I ++ +  A  Y+     LK
Sbjct: 201 AHYDTSKQVDNLMMGLLKARSEAEHENEEEKKALLSDDYLIGSLYDMMAAGYETTAATLK 260

Query: 61  SSTIGLVTLDEMK 73
            S + LV   +++
Sbjct: 261 WSIVYLVNYPDVQ 273


>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
          Length = 1552

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 7   AASEAGRAMHLMKKREKAQQEIELRKKKIEEDLKIDNIEN--KFATHYDAVEQQLK--SS 62
           AAS+      L++KREK   E++  K++IEE  +  +++   ++     +V+++L   + 
Sbjct: 638 AASQKSNESALLEKREKVMLELDKLKRRIEEFRECGDLDMMVQYVKDVGSVQKKLGECTE 697

Query: 63  TIGLVTLDEMKAKQE 77
           TIG +  +E   K E
Sbjct: 698 TIGYINEEEDLFKWE 712


>SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05)
          Length = 867

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/70 (25%), Positives = 34/70 (48%)

Query: 8   ASEAGRAMHLMKKREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIGLV 67
           A+ A     L +   KA +E E+  + +EE  +++N E +       +E+++ + T  + 
Sbjct: 476 ANIAENKRELARTTNKAMREQEVVNRLLEEIKELENFEEEELPDVTTLEEEVVNITQQIA 535

Query: 68  TLDEMKAKQE 77
            L E K K E
Sbjct: 536 ELKEQKTKLE 545


>SB_770| Best HMM Match : DUF837 (HMM E-Value=1.4)
          Length = 269

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/58 (25%), Positives = 34/58 (58%)

Query: 20  KREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIGLVTLDEMKAKQE 77
           + +++Q+E+E  ++K+ +D++    EN +   Y    Q+L+  T     LD++K +Q+
Sbjct: 54  RMKESQREVEEEQEKLFKDIETLEDENFYLRKYVDKIQELEEMTNTSKRLDQLKDRQQ 111


>SB_40852| Best HMM Match : SURF6 (HMM E-Value=3.8)
          Length = 296

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query: 14 AMHLMKKREKAQQEIELRKKKIEEDLKIDNIENKFAT 50
          A  L  +REK +  ++L+    +EDL + NI+N+F++
Sbjct: 24 AAKLKNEREKERLSLKLKGISKQEDLHLKNIQNQFSS 60


>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
          Length = 429

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 14/56 (25%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 22 EKAQQEIELRKKKIEEDLKIDN-IENKFATHYDAVEQQLKSSTIGLVTLDEMKAKQ 76
          ++  Q I+L ++  E +LK+   ++ + +    A E+++KSST+ L  +++ + K+
Sbjct: 34 QREAQLIKLLEENAELELKLKTEVQKRESLEQQAKEKEIKSSTLDLAVMEKQEEKR 89


>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3934

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 3    HYKGAASEAGRAMHLMKKREKAQQEIELRKKKIEEDLKIDNIENK-FATHYDAVEQQLKS 61
            +Y  AASEA      ++ RE+   E+  + + +EE  K   + +K  A  Y+   Q+ K 
Sbjct: 2044 NYAAAASEADLMKTTLQVREETVDELREKVELLEEKEKALELYSKSIAEKYEHESQEKKK 2103

Query: 62   STIGLVTLDEMKAKQEHIV 80
                  TL+    KQ+ ++
Sbjct: 2104 IVEISETLESKNRKQQELL 2122


>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 362

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 6/65 (9%)

Query: 19  KKREKAQQ---EIELRKKKIEEDLKI-DNIENKFATHYDAVEQQLKSSTIGLVTLDEMKA 74
           +KREK  +   +IE +K+K+EE+ +I + +E +     +  E++L+     L  L EMK 
Sbjct: 279 RKREKELEMLRQIEEKKRKLEEEERIKEEVEKQKKIKLEQQEKELRDKL--LKNLKEMKE 336

Query: 75  KQEHI 79
           +++ +
Sbjct: 337 RKQEL 341


>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
          Length = 663

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 20  KREKAQQEIELRKKKIEEDLKIDNI--ENKFATHYDAVEQQLKSSTIGLVTLDEMKAKQE 77
           K E+   E+ + K K+E + KID    E +FA     VE+  K+ T+  +TL   +AK E
Sbjct: 285 KLEEQLGELRILKSKMESEYKIDKATKEQEFAELAKCVEE--KTKTVEHLTLALEEAKDE 342


>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2520

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/74 (22%), Positives = 37/74 (50%)

Query: 165  LPDREREEADLKLREELRLEWVMTQASLKDEPITVTFSYWDGSGHRRNVTLKKGNSIYQF 224
            L +RE+ EADLK + +L  + ++ + + K+          + +       L + +   + 
Sbjct: 1389 LLEREKAEADLKEKFDLEEKALLDKLAEKENSEHELMQRIESTEQENQAKLNQKDKSIEE 1448

Query: 225  LQRCLDALRPEFSE 238
            LQ  LDA++ +F++
Sbjct: 1449 LQASLDAVKKDFND 1462


>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 717

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/61 (27%), Positives = 30/61 (49%)

Query: 18  MKKREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIGLVTLDEMKAKQE 77
           M+  E+ Q+ + LR   +E +    N E K     +A EQ+ +S      T+DE+  + E
Sbjct: 657 MELEEREQEVVSLRALLVEAEKHKKNFEAKVRRISNAFEQEKESHDKAESTMDELCKRYE 716

Query: 78  H 78
           +
Sbjct: 717 N 717


>SB_44425| Best HMM Match : SAM_1 (HMM E-Value=0.00024)
          Length = 414

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/42 (30%), Positives = 24/42 (57%)

Query: 7   AASEAGRAMHLMKKREKAQQEIELRKKKIEEDLKIDNIENKF 48
           A  +  R ++  KK+EK Q+E   ++K +E  + +D +E  F
Sbjct: 209 ALQQLTRIIYTDKKKEKTQEEQVFKEKAMELVVDVDGLEETF 250


>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1120

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 5   KGAASEAGRAMHLMKKREKAQQEIELRKKKIEEDLKIDNIENKFATHY 52
           K    E  R++++    +  ++   +RK++  ED  +DN++   ATH+
Sbjct: 301 KNTEEEGLRSVYVGDPEDLLKEYWTIRKRRSVEDSDLDNVDEIMATHH 348


>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
          Length = 367

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 5   KGAASEAGRAMHLMKKREKAQQEIELRKKKIEED-LKIDNIENKFATH----YDAVEQQL 59
           +G A E+G      KK E  ++E ELRK++ E + L+ ++ + +  +H    Y + + Q 
Sbjct: 89  QGDAKESGDEEEGKKKDEPTEKEEELRKERQENEWLQEESQQTRLESHEYMSYMSKKTQK 148

Query: 60  KSSTIGLVTLDEMKAKQ 76
           + +TI  ++L +   K+
Sbjct: 149 RQTTI--ISLSDRNQKE 163


>SB_18395| Best HMM Match : Ubiq_cyt_C_chap (HMM E-Value=0.74)
          Length = 730

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 18  MKKREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIGLVTLDEMKAKQ 76
           MK+  KAQQ++E R KK   D+K +        H  A+E QL          DEM  ++
Sbjct: 183 MKRYLKAQQDMENRYKKSIADIKKE--LQLIEVHKSALEDQLSHQDAEHEMRDEMPKRR 239


>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
          Length = 1491

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 8    ASEAGRAMHLMKKREKAQQEIELRKKKIEE--------DLKIDNIENKFATHYDAVEQQL 59
            + E G+ +     REK + E    +++I E        ++KI+ ++NKF      +E  L
Sbjct: 1080 SKEVGKMLAEEVMREKLKNETIKYEERINEMSSQMEAYEMKIEQLQNKFKAEKGELEDLL 1139

Query: 60   KSSTIGLVTLDE 71
            + S + + TL E
Sbjct: 1140 QESRVEMETLIE 1151


>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
          Length = 5087

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 6    GAASEAGRAMHLMKKREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTIG 65
            GA SE   A+ + ++RE+  +E+E  K+ +E + + +  E +    +  +  +  ++T+G
Sbjct: 1761 GAPSEEASALGISEEREQETEELEEHKEVVESE-ETEMAEEEEVPAFADIPSE-DTATLG 1818

Query: 66   LVTLDEMKAKQ 76
            +    E+K+ +
Sbjct: 1819 ITEEREVKSDE 1829


>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
          Length = 299

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 8   ASEAGRAMHLMKKREKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQL-KSSTIGL 66
           A +A +A H+   ++ A Q+I   ++KI++ ++    ENK A   +  E+ L K   +  
Sbjct: 76  ARQAAKAAHIKHVQDLANQQIRQTEEKIKQKMEAYR-ENKEAIEKETQEKLLAKDEHVKT 134

Query: 67  VTLDEMKAKQEH 78
           V        +EH
Sbjct: 135 VQAQAQVMAEEH 146


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.316    0.132    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,820,200
Number of Sequences: 59808
Number of extensions: 324463
Number of successful extensions: 1226
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1207
Number of HSP's gapped (non-prelim): 33
length of query: 339
length of database: 16,821,457
effective HSP length: 83
effective length of query: 256
effective length of database: 11,857,393
effective search space: 3035492608
effective search space used: 3035492608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)