GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000865-TA|BGIBMGA000865-PA|IPR007005|XAP5 protein
         (339 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.57 
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    27   0.99 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   1.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.3  
U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    24   5.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.0  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    23   9.3  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 0.57
 Identities = 11/28 (39%), Positives = 20/28 (71%)

Query: 13   RAMHLMKKREKAQQEIELRKKKIEEDLK 40
            +AM L+++ E+  +E+  RKK +E+D K
Sbjct: 984  KAMVLLEREEEQYKEVMRRKKVVEDDKK 1011


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 10/20 (50%), Positives = 16/20 (80%)

Query: 19  KKREKAQQEIELRKKKIEED 38
           ++RE+ QQ++EL K+  EED
Sbjct: 473 ERREREQQDLELAKEMAEED 492


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 2/59 (3%)

Query: 19  KKREKAQQEIELRKK-KIEEDLK-IDNIENKFATHYDAVEQQLKSSTIGLVTLDEMKAK 75
           +K ++ + + E+ KK +IEE+ K I++ +N+     + +   +K+S +GL     +KA+
Sbjct: 410 QKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAE 468



 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 22  EKAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLK 60
           EK   +++L+K+KI E+LK    + +       VE Q++
Sbjct: 681 EKHMAQLKLQKEKITEELKEVMKKTRRQGELTTVESQIR 719


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 9   SEAGRAMHLMKKREKAQQEIELRKKKIEEDL-KIDNIENKFATHYDAVEQQLKSSTIGLV 67
           ++ G+  + +K+ ++   E+  +K+ ++E L K    + K        EQ+ K  T  LV
Sbjct: 633 NQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQ----EQKCKELTARLV 688

Query: 68  TLDEMKAKQE 77
            +DE K K E
Sbjct: 689 NVDEEKVKFE 698


>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
          gambiae putativeribosomal protein S8 mRNA, complete
          cds. ).
          Length = 135

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 10 EAGRAMHLMKKRE-KAQQEIELRKKKIEEDLKIDNIENKFATHYDAVEQQLKSSTI 64
          E+   + L KKRE KA +E  L KK+ + +L+      K A    AVE+Q  +  +
Sbjct: 43 ESHYLLPLGKKRELKAGEEDVLSKKRTKSNLRKYVKRQKNAKIDPAVEEQFNAGRL 98


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 7   AASEAGRAMHLMKKREKAQQEIELRKKKIEE 37
           AA E  +   L ++RE+ Q+E E R+K+  E
Sbjct: 464 AAIEREKERELREQREREQREKEQREKEQRE 494


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 309 WYERNKHIFPASRWEPY 325
           WY R K+ F A R  PY
Sbjct: 15  WYVRRKYTFWADRGVPY 31


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.132    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,124
Number of Sequences: 2123
Number of extensions: 10063
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 13
length of query: 339
length of database: 516,269
effective HSP length: 64
effective length of query: 275
effective length of database: 380,397
effective search space: 104609175
effective search space used: 104609175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)