GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000864-TA|BGIBMGA000864-PA|IPR007420|Protein of unknown
function DUF465
         (1109 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    27   0.71 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.71 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    26   1.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    25   2.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   2.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   2.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    24   5.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   5.0  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   6.6  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   8.7  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   8.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   8.7  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 6/70 (8%)

Query: 94  KYQNLILETQTRD--LLMSQIKSL-EMENLTKDK-EIK-NLTDSLKTKSKKINELQEE-N 147
           KY N+ LE   ++  LL S +  L E    + D  E+K N+ D+++T   K +E Q+E +
Sbjct: 29  KYDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEKQKEGS 88

Query: 148 DTLSNLIMEN 157
           D +   +++N
Sbjct: 89  DFIMRYLIDN 98


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
            candidate 51 protein.
          Length = 771

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 988  LEELKQRYKELDEECETCAEYLKQREE 1014
            +   K RYK+L+++ ET  E  K  EE
Sbjct: 193  IRSFKSRYKDLNQKLETACEQSKSVEE 219


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 261 EDFTSIKNHLELHEPNMTMDLDEKLGENNEFE 292
           ED   +  HL +H PN   +L+ K   ++E +
Sbjct: 79  EDVHKVFQHLMIHRPNWWHELETKFNPHHEIK 110


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 959 KMQKAMEKYTKKDKEFEAKRKELEDCKA-ELEELKQR 994
           K QKA+EK   + KE  A+++E E  K  +L +L++R
Sbjct: 46  KYQKAVEKLLTEQKEL-AEKEEAETLKRYKLNDLEKR 81



 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 120 LTKDKEIKNLTDSLKTKSKKINELQEENDTLSNLIMENVTES 161
           LT+ KE+    ++   K  K+N+L++  +   ++    V E+
Sbjct: 55  LTEQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEA 96


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 959 KMQKAMEKYTKKDKEFEAKRKELEDCKA-ELEELKQR 994
           K QKA+EK   + KE  A+++E E  K  +L +L++R
Sbjct: 206 KYQKAVEKLLTEQKEL-AEKEEAETLKRYKLNDLEKR 241



 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 120 LTKDKEIKNLTDSLKTKSKKINELQEENDTLSNLIMENVTES 161
           LT+ KE+    ++   K  K+N+L++  +   ++    V E+
Sbjct: 215 LTEQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEA 256


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)

Query: 959 KMQKAMEKYTKKDKEFEAKRKELEDCKA-ELEELKQR 994
           K QKA+EK   + KE  A+++E E  K  +L +L++R
Sbjct: 206 KYQKAVEKLLTEQKEL-AEKEEAETLKRYKLNDLEKR 241



 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 120 LTKDKEIKNLTDSLKTKSKKINELQEENDTLSNLIMENVTES 161
           LT+ KE+    ++   K  K+N+L++  +   ++    V E+
Sbjct: 215 LTEQKELAEKEEAETLKRYKLNDLEKRREVYESIFKVEVHEA 256


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 261 EDFTSIKNHLELHEPNMTMDLDEKLGENNEFETKAVKVMSE 301
           E    + +HL  ++PN   +L+ K     E++ K  K++ +
Sbjct: 81  EGVRKVLHHLIKNKPNWWQELEAKFDPKGEYKQKYNKLLEK 121


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 406 NILRIQKERIHEISSAVTIDIVKKENELKEILTKE 440
           NILR+ K  +  +S  +  D V KE +   +LT E
Sbjct: 256 NILRVGKNFVCLLSLIILCDCVVKEAQKSLVLTYE 290


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 5/71 (7%)

Query: 353 DNIINKYQIDLDEILEKYTKVQGDLNECTSELKSVNEKLASLNSQLIEKENACNILRIQK 412
           DN+     ++ D +L  Y K   D   CTSE + + + L    S    K   CN  + QK
Sbjct: 28  DNVDVDKILNNDRVLTNYIKCLMDEGPCTSEGRELKKTLPDALSSGCTK---CN--QKQK 82

Query: 413 ERIHEISSAVT 423
           E   ++   +T
Sbjct: 83  ETAEKVIRHLT 93


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 591 LKEENNSLKSLNDVITREKETQASELERSCQVIKQNGFE 629
           LK+E  ++K +N+   RE+E Q  E  +  Q  KQ   E
Sbjct: 61  LKKELRAVKEINEQARREREEQ--ERHKQQQQEKQQKIE 97


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 591 LKEENNSLKSLNDVITREKETQASELERSCQVIKQNGFE 629
           LK+E  ++K +N+   RE+E Q  E  +  Q  KQ   E
Sbjct: 212 LKKELRAVKEINEQARREREEQ--ERHKQQQQEKQQKIE 248


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 591 LKEENNSLKSLNDVITREKETQASELERSCQVIKQNGFE 629
           LK+E  ++K +N+   RE+E Q  E  +  Q  KQ   E
Sbjct: 271 LKKELRAVKEINEQARREREEQ--ERHKQQQQEKQQKIE 307


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.308    0.126    0.330 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,887
Number of Sequences: 317
Number of extensions: 8613
Number of successful extensions: 47
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 19
length of query: 1109
length of database: 114,650
effective HSP length: 64
effective length of query: 1045
effective length of database: 94,362
effective search space: 98608290
effective search space used: 98608290
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 48 (23.4 bits)