GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000863-TA|BGIBMGA000863-PA|IPR009053|Prefoldin
         (517 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    26   0.55 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    24   2.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   5.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   5.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   5.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   5.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   5.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   8.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   8.9  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 26.2 bits (55), Expect = 0.55
 Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 144 LEEVALEIDLKKNSITKDNISIKTLLDKLITKNETDINELRNSIKYLESVKSEYNTANEK 203
           L ++  ++  + NS  K  + IK  +DK   +NE   + L+ S   LE    ++ + +  
Sbjct: 306 LAKIVTDLCQEANSTKKLIVKIKIDIDKEDERNEVISSALKLSQNELEITACKFFSIDNA 365

Query: 204 LFEQLNNAVDKQNCIQEEVDLLKIENQN 231
           L    N+   K+  ++  +D+ K + +N
Sbjct: 366 LLFSANST--KKLIVKIRIDIDKEDERN 391


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
          protein 15 protein.
          Length = 146

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 7  TLFANNENIRNIIHAFKIRLEECYKEIGQLKSGLQQNVGVGDKTVAELKNDEINSMIRQL 66
          T+  N++  RN +    +   +C KE  +LK G+ + +  G     + + ++++ + + L
Sbjct: 30 TILKNDQMTRNYLDCV-LDKGKCTKEAEKLKKGITETMKNGCVKCEQKQKEDVHKVFQHL 88


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 316 KKVNKTERELEEKQEQLTHLMEQLNDTENNSYKLIENMF 354
           +K+   ++EL EK+E  T    +LND E    ++ E++F
Sbjct: 52  EKLLTEQKELAEKEEAETLKRYKLNDLEKRR-EVYESIF 89


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 316 KKVNKTERELEEKQEQLTHLMEQLNDTENNSYKLIENMF 354
           +K+   ++EL EK+E  T    +LND E    ++ E++F
Sbjct: 212 EKLLTEQKELAEKEEAETLKRYKLNDLEKRR-EVYESIF 249


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 316 KKVNKTERELEEKQEQLTHLMEQLNDTENNSYKLIENMF 354
           +K+   ++EL EK+E  T    +LND E    ++ E++F
Sbjct: 212 EKLLTEQKELAEKEEAETLKRYKLNDLEKRR-EVYESIF 249


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 270 EKLSEIKEKDENFKQEIDMLNEKLICDRREFN 301
           E + +I  +D + + EI+M + ++  ++ EFN
Sbjct: 592 ELIHKIDTEDHDIRDEIEMFSLQIANEQVEFN 623


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 270 EKLSEIKEKDENFKQEIDMLNEKLICDRREFN 301
           E + +I  +D + + EI+M + ++  ++ EFN
Sbjct: 317 ELIHKIDTEDHDIRDEIEMFSLQIANEQVEFN 348


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 270 EKLSEIKEKDENFKQEIDMLNEKLICDRREFN 301
           E + +I+ +D +   EI+M + ++  ++ EFN
Sbjct: 313 ELIHQIQTEDHDIIDEIEMFSLQIANEQVEFN 344


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 270 EKLSEIKEKDENFKQEIDMLNEKLICDRREFN 301
           E + +I+ +D +   EI+M + ++  ++ EFN
Sbjct: 344 ELIHQIQTEDHDIIDEIEMFSLQIANEQVEFN 375


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.308    0.127    0.325 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,149
Number of Sequences: 317
Number of extensions: 3669
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 11
length of query: 517
length of database: 114,650
effective HSP length: 60
effective length of query: 457
effective length of database: 95,630
effective search space: 43702910
effective search space used: 43702910
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 45 (22.2 bits)