GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000861-TA|BGIBMGA000861-PA|undefined
         (149 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5KPU2 Cluster: Glutamate biosynthesis-related protein,...    36   0.48 
UniRef50_A2RA57 Cluster: Function: rta1 of S. cerevisiae confers...    33   2.0  

>UniRef50_Q5KPU2 Cluster: Glutamate biosynthesis-related protein,
           putative; n=1; Filobasidiella neoformans|Rep: Glutamate
           biosynthesis-related protein, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 303

 Score = 35.5 bits (78), Expect = 0.48
 Identities = 14/29 (48%), Positives = 21/29 (72%)

Query: 62  DLLSMIVISEVAISRVAELDFLAVCVSTD 90
           D+++M VI E  ++R AELD+  +C STD
Sbjct: 192 DIINMSVIPEAKLAREAELDYTLICTSTD 220


>UniRef50_A2RA57 Cluster: Function: rta1 of S. cerevisiae confers
           resistance to 7- aminocholesterol; n=1; Aspergillus
           niger|Rep: Function: rta1 of S. cerevisiae confers
           resistance to 7- aminocholesterol - Aspergillus niger
          Length = 387

 Score = 33.5 bits (73), Expect = 2.0
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 28  IWMKIDLLSKIV------IAEDAISRVAELDFLALILMKIDLLSMIVISEVAISRVAELD 81
           I M I LLS I+      +A  A S  + +D    + + ID+L  +V     +  +A L 
Sbjct: 127 ICMTIALLSLILQVIGGSLAHKASSVASSVD--KTVSLGIDILQRLVWRMPMLKMLAVLA 184

Query: 82  FLAVCVSTDDANAILLQRNFWRTFLPVYEI 111
           F  VC+   D   I+   N WR +   YEI
Sbjct: 185 FALVCIIVRDTYRIVESTNGWRGYSYTYEI 214


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.331    0.143    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,655,236
Number of Sequences: 1657284
Number of extensions: 2983649
Number of successful extensions: 8535
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8533
Number of HSP's gapped (non-prelim): 2
length of query: 149
length of database: 575,637,011
effective HSP length: 93
effective length of query: 56
effective length of database: 421,509,599
effective search space: 23604537544
effective search space used: 23604537544
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 68 (31.5 bits)