GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000861-TA|BGIBMGA000861-PA|undefined
         (149 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   9.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   9.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   9.3  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 89  TDDANAILLQRNFWRT 104
           T    A LL+R FWRT
Sbjct: 27  TQFGQAPLLERFFWRT 42


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 82  FLAVCVSTDDANAILLQRNFW 102
           F+ VC+S D   A++     W
Sbjct: 127 FVLVCISMDRYYAVIKPLQLW 147


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 77  VAELDFLAVCVSTDDANAILLQRNFWRTFL 106
           V +  FLA   +T+D     +  +FW +F+
Sbjct: 471 VVDTPFLASTTTTNDIKMQKVLIDFWVSFV 500


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 77  VAELDFLAVCVSTDDANAILLQRNFWRTFL 106
           V +  FLA   +T+D     +  +FW +F+
Sbjct: 471 VVDTPFLASTTTTNDIKMQKVLIDFWVSFV 500


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.331    0.143    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,460
Number of Sequences: 429
Number of extensions: 591
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 149
length of database: 140,377
effective HSP length: 53
effective length of query: 96
effective length of database: 117,640
effective search space: 11293440
effective search space used: 11293440
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 40 (20.2 bits)