Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000860-TA|BGIBMGA000860-PA|undefined
         (79 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015940-1|AAH15940.1|  264|Homo sapiens NT5E protein protein.         27   6.9  
AP008290-11|BAE07763.1|  603|Homo sapiens NADH dehydrogenase sub...    27   6.9  
AL589666-6|CAI40167.1|  264|Homo sapiens 5'-nucleotidase, ecto (...    27   6.9  
AL135903-5|CAH72336.1|  264|Homo sapiens 5'-nucleotidase, ecto (...    27   6.9  

>BC015940-1|AAH15940.1|  264|Homo sapiens NT5E protein protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 21  NVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGPVMDATAWDR 72
           NV KII+    G   ++ +   K   +  ++GGH+  F+ +G      AW R
Sbjct: 211 NVNKIIALGHSG-FEMDKLIAQKVRGVDVVVGGHSNTFLYTGNCFKRIAWAR 261


>AP008290-11|BAE07763.1|  603|Homo sapiens NADH dehydrogenase
           subunit 5 protein.
          Length = 603

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 20  NNVKKIISTKQQGNLGLECVT-GIKALSMIFI-LGGH----ACLFIASGPVMDATAWDRD 73
           NN+KKI++      LGL  VT GI    + F+ +  H    A LF+ SG ++     ++D
Sbjct: 296 NNIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNNEQD 355

Query: 74  L 74
           +
Sbjct: 356 I 356


>AL589666-6|CAI40167.1|  264|Homo sapiens 5'-nucleotidase, ecto
           (CD73) protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 21  NVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGPVMDATAWDR 72
           NV KII+    G   ++ +   K   +  ++GGH+  F+ +G      AW R
Sbjct: 211 NVNKIIALGHSG-FEMDKLIAQKVRGVDVVVGGHSNTFLYTGNCFKRIAWAR 261


>AL135903-5|CAH72336.1|  264|Homo sapiens 5'-nucleotidase, ecto
           (CD73) protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 21  NVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGPVMDATAWDR 72
           NV KII+    G   ++ +   K   +  ++GGH+  F+ +G      AW R
Sbjct: 211 NVNKIIALGHSG-FEMDKLIAQKVRGVDVVVGGHSNTFLYTGNCFKRIAWAR 261


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,189,047
Number of Sequences: 224733
Number of extensions: 327717
Number of successful extensions: 3311
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3311
Number of HSP's gapped (non-prelim): 4
length of query: 79
length of database: 73,234,838
effective HSP length: 58
effective length of query: 21
effective length of database: 60,200,324
effective search space: 1264206804
effective search space used: 1264206804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)