Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000860-TA|BGIBMGA000860-PA|undefined
(79 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g16890.1 68417.m02549 disease resistance protein (TIR-NBS-LRR... 26 3.6
At2g38910.1 68415.m04783 calcium-dependent protein kinase, putat... 26 3.6
At4g04695.1 68417.m00689 calcium-dependent protein kinase, putat... 25 6.3
At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor... 25 6.3
At1g56140.1 68414.m06446 leucine-rich repeat family protein / pr... 25 6.3
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat... 25 6.3
At5g13560.1 68418.m01566 expressed protein weak similarity to SP... 25 8.4
At5g05610.2 68418.m00611 PHD finger family protein contains Pfam... 25 8.4
At5g05610.1 68418.m00610 PHD finger family protein contains Pfam... 25 8.4
>At4g16890.1 68417.m02549 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1301
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 12 LITSFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFILGGHACLFIASGPVM 65
L+T + I N++K++S + + GLE + LS + IL C + + P++
Sbjct: 966 LVTLPTTIGNLQKLVSFEMKECTGLEVLPIDVNLSSLMILDLSGCSSLRTFPLI 1019
>At2g38910.1 68415.m04783 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase, isoform AK1 (CDPK) [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 583
Score = 25.8 bits (54), Expect = 3.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 1 MGKKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKAL 45
+ K DS + + FS +N +KKI +L E + G+K +
Sbjct: 399 LDKPLDSAVLSRLQQFSAMNKLKKIAIKVIAESLSEEEIAGLKEM 443
>At4g04695.1 68417.m00689 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494; contains protein kinase
domain, Pfam:PF00069; contains EF hand domain
(calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 484
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKAL 45
K D V+ + F +N +KK+ NL E + G+K L
Sbjct: 298 KPIDGVVLSRLKQFRDMNKLKKVALKVIAANLSEEEIKGLKTL 340
>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
(CPK9) identical to calmodulin-domain protein kinase
CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 541
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKAL 45
K DS + + F +N +KK+ N+ E + G+KA+
Sbjct: 358 KPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAM 400
>At1g56140.1 68414.m06446 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1032
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/36 (27%), Positives = 22/36 (61%)
Query: 15 SFSVINNVKKIISTKQQGNLGLECVTGIKALSMIFI 50
SFS + ++ +++ GN LE + +K+LS++ +
Sbjct: 261 SFSNLTSLTELLGDISNGNSSLEFIKDMKSLSILVL 296
>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 521
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIKAL 45
K DS + + F +N +KK+ N+ E + G+KA+
Sbjct: 340 KPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAM 382
>At5g13560.1 68418.m01566 expressed protein weak similarity to
SP|O42184 Restin (Cytoplasmic linker protein-170)
(CLIP-170) {Gallus gallus}
Length = 679
Score = 24.6 bits (51), Expect = 8.4
Identities = 8/15 (53%), Positives = 15/15 (100%)
Query: 10 TELITSFSVINNVKK 24
T++IT+FS+++NVK+
Sbjct: 526 TKIITTFSIVDNVKE 540
>At5g05610.2 68418.m00611 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 241
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIK 43
K+ S+I +L T F V+ K I K +LG + G+K
Sbjct: 118 KRLFSLINDLPTLFEVVTGRKPIKDGKPSMDLGSKSRNGVK 158
>At5g05610.1 68418.m00610 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 241
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 3 KKKDSVITELITSFSVINNVKKIISTKQQGNLGLECVTGIK 43
K+ S+I +L T F V+ K I K +LG + G+K
Sbjct: 118 KRLFSLINDLPTLFEVVTGRKPIKDGKPSMDLGSKSRNGVK 158
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.136 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,661,001
Number of Sequences: 28952
Number of extensions: 50118
Number of successful extensions: 113
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103
Number of HSP's gapped (non-prelim): 10
length of query: 79
length of database: 12,070,560
effective HSP length: 58
effective length of query: 21
effective length of database: 10,391,344
effective search space: 218218224
effective search space used: 218218224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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